Gene : Glyma.07G133900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11709:SF66 - LACCASE-17 Genomic Order:  1339
Name:  ? Glyma.07G133900 Secondary Identifier:  ? PAC:30495441
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5466 Glycine max pathologic  
Gmax PWY-6824 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G133900 0.5kb upstream 0.5kb upstream 4819 true Chr07: 15868410-15873228 Glycine max
Glyma.07G133900 0.5kb upstream 0.5kb upstream 500 false Chr07: 15868410-15868909 Glycine max
Glyma.07G133900 0.5kb downstream 0.5kb downstream 4819 true Chr07: 15868910-15873728 Glycine max
Glyma.07G133900 0.5kb downstream 0.5kb downstream 500 false Chr07: 15873229-15873728 Glycine max
Glyma.07G133900 1.0kb upstream 1.0kb upstream 5319 true Chr07: 15867910-15873228 Glycine max
Glyma.07G133900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 15867910-15868909 Glycine max
Glyma.07G133900 1.0kb downstream 1.0kb downstream 5319 true Chr07: 15868910-15874228 Glycine max
Glyma.07G133900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 15873229-15874228 Glycine max
Glyma.07G133900 2.0kb upstream 2.0kb upstream 6319 true Chr07: 15866910-15873228 Glycine max
Glyma.07G133900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 15866910-15868909 Glycine max
Glyma.07G133900 2.0kb downstream 2.0kb downstream 6319 true Chr07: 15868910-15875228 Glycine max
Glyma.07G133900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 15873229-15875228 Glycine max
Glyma.07G133900 5.0kb upstream 5.0kb upstream 9319 true Chr07: 15863910-15873228 Glycine max
Glyma.07G133900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 15863910-15868909 Glycine max
Glyma.07G133900 5.0kb downstream 5.0kb downstream 9319 true Chr07: 15868910-15878228 Glycine max
Glyma.07G133900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 15873229-15878228 Glycine max
Glyma.07G133900 10.0kb upstream 10.0kb upstream 14319 true Chr07: 15858910-15873228 Glycine max
Glyma.07G133900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 15858910-15868909 Glycine max
Glyma.07G133900 10.0kb downstream 10.0kb downstream 14319 true Chr07: 15868910-15883228 Glycine max
Glyma.07G133900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 15873229-15883228 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310343 5265 Fabidae View MSA
124069683 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.635723 0.0 2.29724    
cufflinks 0.0836022 0.0 0.331531 Low  
cufflinks 0.121058 0.0 0.473455 Low  
cufflinks 18.0807 0.0 48.3034   High
cufflinks 4.25552 0.0 12.3281    
cufflinks 0.0586841 0.0 0.235584 Low  
cufflinks 0.00905667 0.0 0.0414814 Low Low
cufflinks 66.646 0.0 200.35 High High
cufflinks 5.33585 0.0 15.0659    
cufflinks 23.639     High High
cufflinks 0.022     Low  
cufflinks 0.026     Low  
cufflinks 0.511        
cufflinks 0.01     Low Low
cufflinks 0.026     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.493       High
cufflinks 0.022     Low  
cufflinks 0.141        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.1        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.307        

0 Strain