Gene : Glyma.07G134400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12942 - STEP II SPLICING FACTOR SLU7 Genomic Order:  1344
Name:  ? Glyma.07G134400 Secondary Identifier:  ? PAC:30492330
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G134400 0.5kb upstream 0.5kb upstream 5033 true Chr07: 15953834-15958866 Glycine max
Glyma.07G134400 0.5kb upstream 0.5kb upstream 500 false Chr07: 15953834-15954333 Glycine max
Glyma.07G134400 0.5kb downstream 0.5kb downstream 5033 true Chr07: 15954334-15959366 Glycine max
Glyma.07G134400 0.5kb downstream 0.5kb downstream 500 false Chr07: 15958867-15959366 Glycine max
Glyma.07G134400 1.0kb upstream 1.0kb upstream 5533 true Chr07: 15953334-15958866 Glycine max
Glyma.07G134400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 15953334-15954333 Glycine max
Glyma.07G134400 1.0kb downstream 1.0kb downstream 5533 true Chr07: 15954334-15959866 Glycine max
Glyma.07G134400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 15958867-15959866 Glycine max
Glyma.07G134400 2.0kb upstream 2.0kb upstream 6533 true Chr07: 15952334-15958866 Glycine max
Glyma.07G134400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 15952334-15954333 Glycine max
Glyma.07G134400 2.0kb downstream 2.0kb downstream 6533 true Chr07: 15954334-15960866 Glycine max
Glyma.07G134400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 15958867-15960866 Glycine max
Glyma.07G134400 5.0kb upstream 5.0kb upstream 9533 true Chr07: 15949334-15958866 Glycine max
Glyma.07G134400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 15949334-15954333 Glycine max
Glyma.07G134400 5.0kb downstream 5.0kb downstream 9533 true Chr07: 15954334-15963866 Glycine max
Glyma.07G134400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 15958867-15963866 Glycine max
Glyma.07G134400 10.0kb upstream 10.0kb upstream 14533 true Chr07: 15944334-15958866 Glycine max
Glyma.07G134400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 15944334-15954333 Glycine max
Glyma.07G134400 10.0kb downstream 10.0kb downstream 14533 true Chr07: 15954334-15968866 Glycine max
Glyma.07G134400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 15958867-15968866 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299040 5265 Fabidae View MSA
124063285 5270 Rosid View MSA
123752211 5271 Pentapetalae View MSA
122792608 5272 Eudicot View MSA
122043272 5273 Angiosperm View MSA
121344564 5274 Embryophyte View MSA
123424269 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.2688 0.0 70.2296 High  
cufflinks 17.0501 0.0 46.0296   Low
cufflinks 34.1716 0.0 98.7781 High High
cufflinks 20.9714 0.0 57.4622 High  
cufflinks 15.41 0.0 41.4053   Low
cufflinks 21.2419 0.0 58.1172    
cufflinks 25.9751 0.0 72.3204 High  
cufflinks 22.5251 0.0 61.9941 High  
cufflinks 18.2734 0.0 49.5071    
cufflinks 9.309     High Low
cufflinks 24.53     High High
cufflinks 18.16     High  
cufflinks 10.731     High Low
cufflinks 9.557     High Low
cufflinks 18.759     High  
cufflinks 16.145     High  
cufflinks 10.416     High Low
cufflinks 13.693     High  
cufflinks 13.123     High  
cufflinks 17.366     High  
cufflinks 19.422     High  
cufflinks 17.04     High  
cufflinks 12.604     High  
cufflinks 24.187     High High
cufflinks 16.579     High  
cufflinks 17.904     High  

0 Strain