Gene : Glyma.07G124000 G. max Wm82.a2.v1
Defline:  (1 of 6) 6.1.1.17 - Glutamate--tRNA ligase / Glutamyl-tRNA synthetase Genomic Order:  1240
Name:  ? Glyma.07G124000 Secondary Identifier:  ? PAC:30492742
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5188 Glycine max pathologic  
Gmax PWY-5918 Glycine max pathologic  
Gmax TRNA-CHARGING-PWY Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G124000 0.5kb upstream 0.5kb upstream 18475 true Chr07: 14684788-14703262 Glycine max
Glyma.07G124000 0.5kb upstream 0.5kb upstream 500 false Chr07: 14702763-14703262 Glycine max
Glyma.07G124000 0.5kb downstream 0.5kb downstream 18475 true Chr07: 14684288-14702762 Glycine max
Glyma.07G124000 0.5kb downstream 0.5kb downstream 500 false Chr07: 14684288-14684787 Glycine max
Glyma.07G124000 1.0kb upstream 1.0kb upstream 18975 true Chr07: 14684788-14703762 Glycine max
Glyma.07G124000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 14702763-14703762 Glycine max
Glyma.07G124000 1.0kb downstream 1.0kb downstream 18975 true Chr07: 14683788-14702762 Glycine max
Glyma.07G124000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 14683788-14684787 Glycine max
Glyma.07G124000 2.0kb upstream 2.0kb upstream 19975 true Chr07: 14684788-14704762 Glycine max
Glyma.07G124000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 14702763-14704762 Glycine max
Glyma.07G124000 2.0kb downstream 2.0kb downstream 19975 true Chr07: 14682788-14702762 Glycine max
Glyma.07G124000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 14682788-14684787 Glycine max
Glyma.07G124000 5.0kb upstream 5.0kb upstream 22975 true Chr07: 14684788-14707762 Glycine max
Glyma.07G124000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 14702763-14707762 Glycine max
Glyma.07G124000 5.0kb downstream 5.0kb downstream 22975 true Chr07: 14679788-14702762 Glycine max
Glyma.07G124000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 14679788-14684787 Glycine max
Glyma.07G124000 10.0kb upstream 10.0kb upstream 27975 true Chr07: 14684788-14712762 Glycine max
Glyma.07G124000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 14702763-14712762 Glycine max
Glyma.07G124000 10.0kb downstream 10.0kb downstream 27975 true Chr07: 14674788-14702762 Glycine max
Glyma.07G124000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 14674788-14684787 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301417 5265 Fabidae View MSA
124063360 5270 Rosid View MSA
123737264 5271 Pentapetalae View MSA
122787973 5272 Eudicot View MSA
122041760 5273 Angiosperm View MSA
121345245 5274 Embryophyte View MSA
123424323 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.77524 0.0 28.3824   High
cufflinks 5.77044 0.0 22.3035    
cufflinks 4.26198 0.0 15.3321    
cufflinks 4.23272 0.0 17.7432    
cufflinks 4.37503 0.0 21.7981    
cufflinks 3.09982 0.0 12.4393   Low
cufflinks 6.35003 0.0 24.3506   High
cufflinks 3.3008 0.0 15.3468   Low
cufflinks 3.53153 0.0 15.8526    
cufflinks 0.189        
cufflinks 0.153        
cufflinks 0.213        
cufflinks 0.169        
cufflinks 0.218        
cufflinks 0.245        
cufflinks 0.424       High
cufflinks 0.09       Low
cufflinks 0.241        
cufflinks 0.313        
cufflinks 0.337        
cufflinks 0.154        
cufflinks 0.326        
cufflinks 0.402       High
cufflinks 0.131       Low
cufflinks 0.391       High
cufflinks 0.103       Low

0 Strain