Gene : PhHAL.5G437600 P. hallii HAL v2.1

Defline:  (1 of 1) K09494 - T-complex protein 1 subunit beta (CCT2) Genomic Order:  3704
Name:  ? PhHAL.5G437600 Secondary Identifier:  ? PAC:40427325

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.5G437600 0.5kb upstream 0.5kb upstream 5006 true Chr05: 52544143-52549148 Panicum hallii HAL
PhHAL.5G437600 0.5kb upstream 0.5kb upstream 500 false Chr05: 52548649-52549148 Panicum hallii HAL
PhHAL.5G437600 0.5kb downstream 0.5kb downstream 5006 true Chr05: 52543643-52548648 Panicum hallii HAL
PhHAL.5G437600 0.5kb downstream 0.5kb downstream 500 false Chr05: 52543643-52544142 Panicum hallii HAL
PhHAL.5G437600 1.0kb upstream 1.0kb upstream 5506 true Chr05: 52544143-52549648 Panicum hallii HAL
PhHAL.5G437600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 52548649-52549648 Panicum hallii HAL
PhHAL.5G437600 1.0kb downstream 1.0kb downstream 5506 true Chr05: 52543143-52548648 Panicum hallii HAL
PhHAL.5G437600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 52543143-52544142 Panicum hallii HAL
PhHAL.5G437600 2.0kb upstream 2.0kb upstream 6506 true Chr05: 52544143-52550648 Panicum hallii HAL
PhHAL.5G437600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 52548649-52550648 Panicum hallii HAL
PhHAL.5G437600 2.0kb downstream 2.0kb downstream 6506 true Chr05: 52542143-52548648 Panicum hallii HAL
PhHAL.5G437600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 52542143-52544142 Panicum hallii HAL
PhHAL.5G437600 5.0kb upstream 5.0kb upstream 9506 true Chr05: 52544143-52553648 Panicum hallii HAL
PhHAL.5G437600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 52548649-52553648 Panicum hallii HAL
PhHAL.5G437600 5.0kb downstream 5.0kb downstream 9506 true Chr05: 52539143-52548648 Panicum hallii HAL
PhHAL.5G437600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 52539143-52544142 Panicum hallii HAL
PhHAL.5G437600 10.0kb upstream 10.0kb upstream 14506 true Chr05: 52544143-52558648 Panicum hallii HAL
PhHAL.5G437600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 52548649-52558648 Panicum hallii HAL
PhHAL.5G437600 10.0kb downstream 10.0kb downstream 14506 true Chr05: 52534143-52548648 Panicum hallii HAL
PhHAL.5G437600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 52534143-52544142 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190623 5267 Panicoideae View MSA
124571728 5269 Grass View MSA
122042218 5273 Angiosperm View MSA
121346616 5274 Embryophyte View MSA
123426772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier