Gene : PhHAL.5G473200 P. hallii HAL v2.1

Defline:  (1 of 1) PTHR31412//PTHR31412:SF5 - FAMILY NOT NAMED // ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED Genomic Order:  4051
Name:  ? PhHAL.5G473200 Secondary Identifier:  ? PAC:40424598

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.5G473200 0.5kb upstream 0.5kb upstream 5285 true Chr05: 55058394-55063678 Panicum hallii HAL
PhHAL.5G473200 0.5kb upstream 0.5kb upstream 500 false Chr05: 55063179-55063678 Panicum hallii HAL
PhHAL.5G473200 0.5kb downstream 0.5kb downstream 5285 true Chr05: 55057894-55063178 Panicum hallii HAL
PhHAL.5G473200 0.5kb downstream 0.5kb downstream 500 false Chr05: 55057894-55058393 Panicum hallii HAL
PhHAL.5G473200 1.0kb upstream 1.0kb upstream 5785 true Chr05: 55058394-55064178 Panicum hallii HAL
PhHAL.5G473200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 55063179-55064178 Panicum hallii HAL
PhHAL.5G473200 1.0kb downstream 1.0kb downstream 5785 true Chr05: 55057394-55063178 Panicum hallii HAL
PhHAL.5G473200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 55057394-55058393 Panicum hallii HAL
PhHAL.5G473200 2.0kb upstream 2.0kb upstream 6785 true Chr05: 55058394-55065178 Panicum hallii HAL
PhHAL.5G473200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 55063179-55065178 Panicum hallii HAL
PhHAL.5G473200 2.0kb downstream 2.0kb downstream 6785 true Chr05: 55056394-55063178 Panicum hallii HAL
PhHAL.5G473200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 55056394-55058393 Panicum hallii HAL
PhHAL.5G473200 5.0kb upstream 5.0kb upstream 9785 true Chr05: 55058394-55068178 Panicum hallii HAL
PhHAL.5G473200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 55063179-55068178 Panicum hallii HAL
PhHAL.5G473200 5.0kb downstream 5.0kb downstream 9785 true Chr05: 55053394-55063178 Panicum hallii HAL
PhHAL.5G473200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 55053394-55058393 Panicum hallii HAL
PhHAL.5G473200 10.0kb upstream 10.0kb upstream 14785 true Chr05: 55058394-55073178 Panicum hallii HAL
PhHAL.5G473200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 55063179-55073178 Panicum hallii HAL
PhHAL.5G473200 10.0kb downstream 10.0kb downstream 14785 true Chr05: 55048394-55063178 Panicum hallii HAL
PhHAL.5G473200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 55048394-55058393 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175944 5267 Panicoideae View MSA
124573045 5269 Grass View MSA
122044367 5273 Angiosperm View MSA
121345535 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier