Gene : Glyma.07G129300 G. max Wm82.a2.v1
Defline:  (1 of 4) 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Genomic Order:  1293
Name:  ? Glyma.07G129300 Secondary Identifier:  ? PAC:30494392
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6556 Glycine max pathologic  
Gmax PWY-7193 Glycine max pathologic  
Gmax PWY-7196 Glycine max pathologic  
Gmax PWY-7199 Glycine max pathologic  
Gmax PWY-7200 Glycine max pathologic  

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G129300 0.5kb upstream 0.5kb upstream 1911 true Chr07: 15395566-15397476 Glycine max
Glyma.07G129300 0.5kb upstream 0.5kb upstream 500 false Chr07: 15395566-15396065 Glycine max
Glyma.07G129300 0.5kb downstream 0.5kb downstream 1911 true Chr07: 15396066-15397976 Glycine max
Glyma.07G129300 0.5kb downstream 0.5kb downstream 500 false Chr07: 15397477-15397976 Glycine max
Glyma.07G129300 1.0kb upstream 1.0kb upstream 2411 true Chr07: 15395066-15397476 Glycine max
Glyma.07G129300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 15395066-15396065 Glycine max
Glyma.07G129300 1.0kb downstream 1.0kb downstream 2411 true Chr07: 15396066-15398476 Glycine max
Glyma.07G129300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 15397477-15398476 Glycine max
Glyma.07G129300 2.0kb upstream 2.0kb upstream 3411 true Chr07: 15394066-15397476 Glycine max
Glyma.07G129300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 15394066-15396065 Glycine max
Glyma.07G129300 2.0kb downstream 2.0kb downstream 3411 true Chr07: 15396066-15399476 Glycine max
Glyma.07G129300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 15397477-15399476 Glycine max
Glyma.07G129300 5.0kb upstream 5.0kb upstream 6411 true Chr07: 15391066-15397476 Glycine max
Glyma.07G129300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 15391066-15396065 Glycine max
Glyma.07G129300 5.0kb downstream 5.0kb downstream 6411 true Chr07: 15396066-15402476 Glycine max
Glyma.07G129300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 15397477-15402476 Glycine max
Glyma.07G129300 10.0kb upstream 10.0kb upstream 11411 true Chr07: 15386066-15397476 Glycine max
Glyma.07G129300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 15386066-15396065 Glycine max
Glyma.07G129300 10.0kb downstream 10.0kb downstream 11411 true Chr07: 15396066-15407476 Glycine max
Glyma.07G129300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 15397477-15407476 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306341 5265 Fabidae View MSA
124068161 5270 Rosid View MSA
123744425 5271 Pentapetalae View MSA
122793352 5272 Eudicot View MSA
122048037 5273 Angiosperm View MSA
121343942 5274 Embryophyte View MSA
123424852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.6638 0.0 79.1495 High  
cufflinks 16.6217 0.0 45.3279    
cufflinks 70.8391 0.0 194.551 High High
cufflinks 17.2781 0.0 46.9653    
cufflinks 30.1268 0.0 80.3779 High  
cufflinks 28.0883 0.0 74.9619 High  
cufflinks 5.07104 0.0 15.7115   Low
cufflinks 33.9891 0.0 90.7065 High  
cufflinks 15.843 0.0 43.1828    
cufflinks 5.476        
cufflinks 51.908     High High
cufflinks 12.253     High  
cufflinks 5.453        
cufflinks 2.902        
cufflinks 57.362     High High
cufflinks 3.795        
cufflinks 11.324     High  
cufflinks 3.701        
cufflinks 5.248        
cufflinks 3.433        
cufflinks 70.833     High High
cufflinks 3.992        
cufflinks 2.873        
cufflinks 59.713     High High
cufflinks 3.318        
cufflinks 84.793     High High

0 Strain