Gene : Glyma.07G120400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10772:SF13 - CHLOROPLAST CHAPERONIN 10 Genomic Order:  1204
Name:  ? Glyma.07G120400 Secondary Identifier:  ? PAC:30493641
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G120400 0.5kb upstream 0.5kb upstream 4821 true Chr07: 13866744-13871564 Glycine max
Glyma.07G120400 0.5kb upstream 0.5kb upstream 500 false Chr07: 13866744-13867243 Glycine max
Glyma.07G120400 0.5kb downstream 0.5kb downstream 4821 true Chr07: 13867244-13872064 Glycine max
Glyma.07G120400 0.5kb downstream 0.5kb downstream 500 false Chr07: 13871565-13872064 Glycine max
Glyma.07G120400 1.0kb upstream 1.0kb upstream 5321 true Chr07: 13866244-13871564 Glycine max
Glyma.07G120400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 13866244-13867243 Glycine max
Glyma.07G120400 1.0kb downstream 1.0kb downstream 5321 true Chr07: 13867244-13872564 Glycine max
Glyma.07G120400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 13871565-13872564 Glycine max
Glyma.07G120400 2.0kb upstream 2.0kb upstream 6321 true Chr07: 13865244-13871564 Glycine max
Glyma.07G120400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 13865244-13867243 Glycine max
Glyma.07G120400 2.0kb downstream 2.0kb downstream 6321 true Chr07: 13867244-13873564 Glycine max
Glyma.07G120400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 13871565-13873564 Glycine max
Glyma.07G120400 5.0kb upstream 5.0kb upstream 9321 true Chr07: 13862244-13871564 Glycine max
Glyma.07G120400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 13862244-13867243 Glycine max
Glyma.07G120400 5.0kb downstream 5.0kb downstream 9321 true Chr07: 13867244-13876564 Glycine max
Glyma.07G120400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 13871565-13876564 Glycine max
Glyma.07G120400 10.0kb upstream 10.0kb upstream 14321 true Chr07: 13857244-13871564 Glycine max
Glyma.07G120400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 13857244-13867243 Glycine max
Glyma.07G120400 10.0kb downstream 10.0kb downstream 14321 true Chr07: 13867244-13881564 Glycine max
Glyma.07G120400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 13871565-13881564 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301614 5265 Fabidae View MSA
124060577 5270 Rosid View MSA
123741920 5271 Pentapetalae View MSA
122785920 5272 Eudicot View MSA
122042502 5273 Angiosperm View MSA
121347169 5274 Embryophyte View MSA
123426072 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.5386 0.0 154.037 High High
cufflinks 44.7905 0.0 119.498 High  
cufflinks 19.5016 0.0 53.6487   Low
cufflinks 26.8009 0.0 72.3337 High  
cufflinks 35.7325 0.0 95.5801 High  
cufflinks 25.9205 0.0 70.1287 High  
cufflinks 28.2152 0.0 76.0818 High  
cufflinks 33.4747 0.0 89.6092 High  
cufflinks 35.9893 0.0 96.1904 High  
cufflinks 3.61        
cufflinks 1.091       Low
cufflinks 3.012        
cufflinks 4.669        
cufflinks 5.221        
cufflinks 1.157       Low
cufflinks 9.321     High High
cufflinks 1.665        
cufflinks 3.351        
cufflinks 4.141        
cufflinks 8.146     High High
cufflinks 0.907       Low
cufflinks 8.031     High High
cufflinks 8.792     High High
cufflinks 1.173       Low
cufflinks 8.589     High High
cufflinks 1.344       Low

0 Strain