Gene : Glyma.07G122000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10210:SF58 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 5, CHLOROPLASTIC Genomic Order:  1220
Name:  ? Glyma.07G122000 Secondary Identifier:  ? PAC:30493137
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-662 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G122000 0.5kb upstream 0.5kb upstream 14531 true Chr07: 14276196-14290726 Glycine max
Glyma.07G122000 0.5kb upstream 0.5kb upstream 500 false Chr07: 14290227-14290726 Glycine max
Glyma.07G122000 0.5kb downstream 0.5kb downstream 14531 true Chr07: 14275696-14290226 Glycine max
Glyma.07G122000 0.5kb downstream 0.5kb downstream 500 false Chr07: 14275696-14276195 Glycine max
Glyma.07G122000 1.0kb upstream 1.0kb upstream 15031 true Chr07: 14276196-14291226 Glycine max
Glyma.07G122000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 14290227-14291226 Glycine max
Glyma.07G122000 1.0kb downstream 1.0kb downstream 15031 true Chr07: 14275196-14290226 Glycine max
Glyma.07G122000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 14275196-14276195 Glycine max
Glyma.07G122000 2.0kb upstream 2.0kb upstream 16031 true Chr07: 14276196-14292226 Glycine max
Glyma.07G122000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 14290227-14292226 Glycine max
Glyma.07G122000 2.0kb downstream 2.0kb downstream 16031 true Chr07: 14274196-14290226 Glycine max
Glyma.07G122000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 14274196-14276195 Glycine max
Glyma.07G122000 5.0kb upstream 5.0kb upstream 19031 true Chr07: 14276196-14295226 Glycine max
Glyma.07G122000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 14290227-14295226 Glycine max
Glyma.07G122000 5.0kb downstream 5.0kb downstream 19031 true Chr07: 14271196-14290226 Glycine max
Glyma.07G122000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 14271196-14276195 Glycine max
Glyma.07G122000 10.0kb upstream 10.0kb upstream 24031 true Chr07: 14276196-14300226 Glycine max
Glyma.07G122000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 14290227-14300226 Glycine max
Glyma.07G122000 10.0kb downstream 10.0kb downstream 24031 true Chr07: 14266196-14290226 Glycine max
Glyma.07G122000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 14266196-14276195 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304636 5265 Fabidae View MSA
124060795 5270 Rosid View MSA
123749025 5271 Pentapetalae View MSA
122788028 5272 Eudicot View MSA
122042217 5273 Angiosperm View MSA
121347994 5274 Embryophyte View MSA
123427852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2809 0.0 58.8397   High
cufflinks 6.16846 0.0 30.9952    
cufflinks 6.92713 0.0 46.4913    
cufflinks 4.55785 0.0 32.2911    
cufflinks 5.52203 0.0 28.3207    
cufflinks 5.15428 0.0 22.9315    
cufflinks 3.16778 0.0 19.3765   Low
cufflinks 7.62648 0.0 50.0358    
cufflinks 5.63403 0.0 45.4654    
cufflinks 0.09     Low  
cufflinks 0.042     Low Low
cufflinks 0.104     Low  
cufflinks 0.086     Low  
cufflinks 0.097        
cufflinks 0.082        
cufflinks 0.145       High
cufflinks 0.069        
cufflinks 0.109     Low  
cufflinks 0.121        
cufflinks 0.146       High
cufflinks 0.053     Low Low
cufflinks 0.15       High
cufflinks 0.142       High
cufflinks 0.052     Low Low
cufflinks 0.146       High
cufflinks 0.071        

0 Strain