Gene : Glyma.07G172000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10788:SF48 - ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 Genomic Order:  1720
Name:  ? Glyma.07G172000 Secondary Identifier:  ? PAC:30491395
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G172000 0.5kb upstream 0.5kb upstream 5138 true Chr07: 29897101-29902238 Glycine max
Glyma.07G172000 0.5kb upstream 0.5kb upstream 500 false Chr07: 29901739-29902238 Glycine max
Glyma.07G172000 0.5kb downstream 0.5kb downstream 5138 true Chr07: 29896601-29901738 Glycine max
Glyma.07G172000 0.5kb downstream 0.5kb downstream 500 false Chr07: 29896601-29897100 Glycine max
Glyma.07G172000 1.0kb upstream 1.0kb upstream 5638 true Chr07: 29897101-29902738 Glycine max
Glyma.07G172000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 29901739-29902738 Glycine max
Glyma.07G172000 1.0kb downstream 1.0kb downstream 5638 true Chr07: 29896101-29901738 Glycine max
Glyma.07G172000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 29896101-29897100 Glycine max
Glyma.07G172000 2.0kb upstream 2.0kb upstream 6638 true Chr07: 29897101-29903738 Glycine max
Glyma.07G172000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 29901739-29903738 Glycine max
Glyma.07G172000 2.0kb downstream 2.0kb downstream 6638 true Chr07: 29895101-29901738 Glycine max
Glyma.07G172000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 29895101-29897100 Glycine max
Glyma.07G172000 5.0kb upstream 5.0kb upstream 9638 true Chr07: 29897101-29906738 Glycine max
Glyma.07G172000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 29901739-29906738 Glycine max
Glyma.07G172000 5.0kb downstream 5.0kb downstream 9638 true Chr07: 29892101-29901738 Glycine max
Glyma.07G172000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 29892101-29897100 Glycine max
Glyma.07G172000 10.0kb upstream 10.0kb upstream 14638 true Chr07: 29897101-29911738 Glycine max
Glyma.07G172000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 29901739-29911738 Glycine max
Glyma.07G172000 10.0kb downstream 10.0kb downstream 14638 true Chr07: 29887101-29901738 Glycine max
Glyma.07G172000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 29887101-29897100 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311235 5265 Fabidae View MSA
124065134 5270 Rosid View MSA
123751102 5271 Pentapetalae View MSA
122786361 5272 Eudicot View MSA
122049755 5273 Angiosperm View MSA
121348711 5274 Embryophyte View MSA
123425695 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.6517 0.0 66.7136 High  
cufflinks 19.8571 0.0 55.0466    
cufflinks 43.7114 0.0 135.615 High High
cufflinks 14.424 0.0 39.0486    
cufflinks 15.3508 0.0 41.6593    
cufflinks 12.3029 0.0 33.0561   Low
cufflinks 26.5072 0.0 75.6827 High  
cufflinks 15.9595 0.0 43.4916    
cufflinks 22.1908 0.0 62.2306 High  
cufflinks 9.512     High Low
cufflinks 49.984     High  
cufflinks 37.101     High  
cufflinks 12.457     High Low
cufflinks 9.904     High Low
cufflinks 73.133     High High
cufflinks 46.156     High  
cufflinks 10.433     High Low
cufflinks 24.661     High  
cufflinks 21.936     High  
cufflinks 54.558     High  
cufflinks 48.929     High  
cufflinks 43.488     High  
cufflinks 17.891     High  
cufflinks 41.268     High  
cufflinks 58.239     High High
cufflinks 30.58     High  

0 Strain