Gene : Glyma.07G172800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31065:SF15 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  1728
Name:  ? Glyma.07G172800 Secondary Identifier:  ? PAC:30494622
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G172800 0.5kb upstream 0.5kb upstream 3078 true Chr07: 30223447-30226524 Glycine max
Glyma.07G172800 0.5kb upstream 0.5kb upstream 500 false Chr07: 30223447-30223946 Glycine max
Glyma.07G172800 0.5kb downstream 0.5kb downstream 3078 true Chr07: 30223947-30227024 Glycine max
Glyma.07G172800 0.5kb downstream 0.5kb downstream 500 false Chr07: 30226525-30227024 Glycine max
Glyma.07G172800 1.0kb upstream 1.0kb upstream 3578 true Chr07: 30222947-30226524 Glycine max
Glyma.07G172800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 30222947-30223946 Glycine max
Glyma.07G172800 1.0kb downstream 1.0kb downstream 3578 true Chr07: 30223947-30227524 Glycine max
Glyma.07G172800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 30226525-30227524 Glycine max
Glyma.07G172800 2.0kb upstream 2.0kb upstream 4578 true Chr07: 30221947-30226524 Glycine max
Glyma.07G172800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 30221947-30223946 Glycine max
Glyma.07G172800 2.0kb downstream 2.0kb downstream 4578 true Chr07: 30223947-30228524 Glycine max
Glyma.07G172800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 30226525-30228524 Glycine max
Glyma.07G172800 5.0kb upstream 5.0kb upstream 7578 true Chr07: 30218947-30226524 Glycine max
Glyma.07G172800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 30218947-30223946 Glycine max
Glyma.07G172800 5.0kb downstream 5.0kb downstream 7578 true Chr07: 30223947-30231524 Glycine max
Glyma.07G172800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 30226525-30231524 Glycine max
Glyma.07G172800 10.0kb upstream 10.0kb upstream 12578 true Chr07: 30213947-30226524 Glycine max
Glyma.07G172800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 30213947-30223946 Glycine max
Glyma.07G172800 10.0kb downstream 10.0kb downstream 12578 true Chr07: 30223947-30236524 Glycine max
Glyma.07G172800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 30226525-30236524 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791790 5273 Angiosperm View MSA
122316073 5265 Fabidae View MSA
124037041 5270 Rosid View MSA
123743284 5271 Pentapetalae View MSA
122793533 5272 Eudicot View MSA
121063080 5274 Embryophyte View MSA
123102864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.489089 0.0 2.4241    
cufflinks 0.686401 0.0 4.20705    
cufflinks 0.326596 0.0 2.27659   Low
cufflinks 0.433109 0.0 2.15239    
cufflinks 1.82771 0.0 9.4778   High
cufflinks 1.03137 0.0 5.92916    
cufflinks 0.492664 0.0 3.25057    
cufflinks 1.66201 0.0 8.85984    
cufflinks 2.34156 0.0 8.84079   High
cufflinks 0.526       High
cufflinks 0.34        
cufflinks 0.089     Low Low
cufflinks 0.728       High
cufflinks 0.762       High
cufflinks 0.335        
cufflinks 0.118        
cufflinks 0.5        
cufflinks 0.128        
cufflinks 0.079     Low Low
cufflinks 0.132        
cufflinks 0.344        
cufflinks 0.114        
cufflinks 0.069     Low Low
cufflinks 0.372        
cufflinks 0.089     Low Low
cufflinks 0.368        

0 Strain