Gene : Glyma.07G174800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31062:SF44 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED Genomic Order:  1748
Name:  ? Glyma.07G174800 Secondary Identifier:  ? PAC:30491436
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G174800 0.5kb upstream 0.5kb upstream 4229 true Chr07: 31521742-31525970 Glycine max
Glyma.07G174800 0.5kb upstream 0.5kb upstream 500 false Chr07: 31521742-31522241 Glycine max
Glyma.07G174800 0.5kb downstream 0.5kb downstream 4229 true Chr07: 31522242-31526470 Glycine max
Glyma.07G174800 0.5kb downstream 0.5kb downstream 500 false Chr07: 31525971-31526470 Glycine max
Glyma.07G174800 1.0kb upstream 1.0kb upstream 4729 true Chr07: 31521242-31525970 Glycine max
Glyma.07G174800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 31521242-31522241 Glycine max
Glyma.07G174800 1.0kb downstream 1.0kb downstream 4729 true Chr07: 31522242-31526970 Glycine max
Glyma.07G174800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 31525971-31526970 Glycine max
Glyma.07G174800 2.0kb upstream 2.0kb upstream 5729 true Chr07: 31520242-31525970 Glycine max
Glyma.07G174800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 31520242-31522241 Glycine max
Glyma.07G174800 2.0kb downstream 2.0kb downstream 5729 true Chr07: 31522242-31527970 Glycine max
Glyma.07G174800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 31525971-31527970 Glycine max
Glyma.07G174800 5.0kb upstream 5.0kb upstream 8729 true Chr07: 31517242-31525970 Glycine max
Glyma.07G174800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 31517242-31522241 Glycine max
Glyma.07G174800 5.0kb downstream 5.0kb downstream 8729 true Chr07: 31522242-31530970 Glycine max
Glyma.07G174800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 31525971-31530970 Glycine max
Glyma.07G174800 10.0kb upstream 10.0kb upstream 13729 true Chr07: 31512242-31525970 Glycine max
Glyma.07G174800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 31512242-31522241 Glycine max
Glyma.07G174800 10.0kb downstream 10.0kb downstream 13729 true Chr07: 31522242-31535970 Glycine max
Glyma.07G174800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 31525971-31535970 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309584 5265 Fabidae View MSA
124065411 5270 Rosid View MSA
123745247 5271 Pentapetalae View MSA
122794660 5272 Eudicot View MSA
122049542 5273 Angiosperm View MSA
121347970 5274 Embryophyte View MSA
123380694 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.76719 0.0 15.0959   Low
cufflinks 5.16014 0.0 21.9251   Low
cufflinks 4.82049 0.0 17.7622   Low
cufflinks 13.4718 0.0 46.9598    
cufflinks 12.9817 0.0 45.4713    
cufflinks 14.743 0.0 51.0541    
cufflinks 12.2349 0.0 43.1628    
cufflinks 23.6828 0.0 81.5789 High High
cufflinks 20.0716 0.0 69.0006 High  
cufflinks 1.335        
cufflinks 0.924        
cufflinks 1.44        
cufflinks 1.846       High
cufflinks 1.107        
cufflinks 1.463        
cufflinks 0.488       Low
cufflinks 2.053       High
cufflinks 0.924        
cufflinks 2.313       High
cufflinks 0.548       Low
cufflinks 1.804        
cufflinks 0.7       Low
cufflinks 0.799        
cufflinks 1.538        
cufflinks 0.665       Low
cufflinks 1.375        

0 Strain