Gene : Glyma.07G175000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11922//PTHR11922:SF37 - GMP SYNTHASE-RELATED Genomic Order:  1750
Name:  ? Glyma.07G175000 Secondary Identifier:  ? PAC:30492350
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRPSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G175000 0.5kb upstream 0.5kb upstream 9450 true Chr07: 31546164-31555613 Glycine max
Glyma.07G175000 0.5kb upstream 0.5kb upstream 500 false Chr07: 31555114-31555613 Glycine max
Glyma.07G175000 0.5kb downstream 0.5kb downstream 9450 true Chr07: 31545664-31555113 Glycine max
Glyma.07G175000 0.5kb downstream 0.5kb downstream 500 false Chr07: 31545664-31546163 Glycine max
Glyma.07G175000 1.0kb upstream 1.0kb upstream 9950 true Chr07: 31546164-31556113 Glycine max
Glyma.07G175000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 31555114-31556113 Glycine max
Glyma.07G175000 1.0kb downstream 1.0kb downstream 9950 true Chr07: 31545164-31555113 Glycine max
Glyma.07G175000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 31545164-31546163 Glycine max
Glyma.07G175000 2.0kb upstream 2.0kb upstream 10950 true Chr07: 31546164-31557113 Glycine max
Glyma.07G175000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 31555114-31557113 Glycine max
Glyma.07G175000 2.0kb downstream 2.0kb downstream 10950 true Chr07: 31544164-31555113 Glycine max
Glyma.07G175000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 31544164-31546163 Glycine max
Glyma.07G175000 5.0kb upstream 5.0kb upstream 13950 true Chr07: 31546164-31560113 Glycine max
Glyma.07G175000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 31555114-31560113 Glycine max
Glyma.07G175000 5.0kb downstream 5.0kb downstream 13950 true Chr07: 31541164-31555113 Glycine max
Glyma.07G175000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 31541164-31546163 Glycine max
Glyma.07G175000 10.0kb upstream 10.0kb upstream 18950 true Chr07: 31546164-31565113 Glycine max
Glyma.07G175000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 31555114-31565113 Glycine max
Glyma.07G175000 10.0kb downstream 10.0kb downstream 18950 true Chr07: 31536164-31555113 Glycine max
Glyma.07G175000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 31536164-31546163 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301638 5265 Fabidae View MSA
124061259 5270 Rosid View MSA
123743994 5271 Pentapetalae View MSA
122794235 5272 Eudicot View MSA
122041811 5273 Angiosperm View MSA
121344905 5274 Embryophyte View MSA
123424838 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.489 0.0 119.516 High  
cufflinks 25.2947 0.0 114.865 High  
cufflinks 18.151 0.0 77.7581   Low
cufflinks 25.6364 0.0 116.351 High  
cufflinks 21.4352 0.0 99.2685 High  
cufflinks 23.124 0.0 97.4183 High  
cufflinks 42.0304 0.0 197.116 High High
cufflinks 20.9846 0.0 98.0244    
cufflinks 21.7336 0.0 89.6813 High  
cufflinks 0.778        
cufflinks 0.338       Low
cufflinks 0.802        
cufflinks 0.687        
cufflinks 0.606        
cufflinks 0.643        
cufflinks 1.066        
cufflinks 0.568        
cufflinks 1.33       High
cufflinks 1.23       High
cufflinks 0.941        
cufflinks 0.382       Low
cufflinks 1.071        
cufflinks 1.332       High
cufflinks 0.368       Low
cufflinks 1.008        
cufflinks 0.445       Low

0 Strain