Gene : Glyma.07G178500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31003:SF7 - F14J22.20 PROTEIN Genomic Order:  1785
Name:  ? Glyma.07G178500 Secondary Identifier:  ? PAC:30492414
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G178500 0.5kb upstream 0.5kb upstream 3608 true Chr07: 34202991-34206598 Glycine max
Glyma.07G178500 0.5kb upstream 0.5kb upstream 500 false Chr07: 34206099-34206598 Glycine max
Glyma.07G178500 0.5kb downstream 0.5kb downstream 3608 true Chr07: 34202491-34206098 Glycine max
Glyma.07G178500 0.5kb downstream 0.5kb downstream 500 false Chr07: 34202491-34202990 Glycine max
Glyma.07G178500 1.0kb upstream 1.0kb upstream 4108 true Chr07: 34202991-34207098 Glycine max
Glyma.07G178500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 34206099-34207098 Glycine max
Glyma.07G178500 1.0kb downstream 1.0kb downstream 4108 true Chr07: 34201991-34206098 Glycine max
Glyma.07G178500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 34201991-34202990 Glycine max
Glyma.07G178500 2.0kb upstream 2.0kb upstream 5108 true Chr07: 34202991-34208098 Glycine max
Glyma.07G178500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 34206099-34208098 Glycine max
Glyma.07G178500 2.0kb downstream 2.0kb downstream 5108 true Chr07: 34200991-34206098 Glycine max
Glyma.07G178500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 34200991-34202990 Glycine max
Glyma.07G178500 5.0kb upstream 5.0kb upstream 8108 true Chr07: 34202991-34211098 Glycine max
Glyma.07G178500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 34206099-34211098 Glycine max
Glyma.07G178500 5.0kb downstream 5.0kb downstream 8108 true Chr07: 34197991-34206098 Glycine max
Glyma.07G178500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 34197991-34202990 Glycine max
Glyma.07G178500 10.0kb upstream 10.0kb upstream 13108 true Chr07: 34202991-34216098 Glycine max
Glyma.07G178500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 34206099-34216098 Glycine max
Glyma.07G178500 10.0kb downstream 10.0kb downstream 13108 true Chr07: 34192991-34206098 Glycine max
Glyma.07G178500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 34192991-34202990 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253673 5265 Fabidae View MSA
123996176 5270 Rosid View MSA
123742212 5271 Pentapetalae View MSA
122792121 5272 Eudicot View MSA
122049766 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0384439 0.0 0.156613 Low Low
cufflinks 0.0276837 0.0 0.114799 Low Low
cufflinks 0.7663 0.0 2.70732    
cufflinks 0.721013 0.0 2.55986    
cufflinks 0.678845 0.0 2.42873    
cufflinks 4.52333 0.0 12.8856   High
cufflinks 0.501224 0.0 1.82806    
cufflinks 0.214399 0.0 0.814077 Low  
cufflinks 1.22483 0.0 4.15114    
cufflinks 0.347        
cufflinks 2.69       High
cufflinks 0.941        
cufflinks 0.107        
cufflinks 0.258        
cufflinks 12.489     High High
cufflinks 0.006     Low Low
cufflinks 0.06     Low  
cufflinks 0.056     Low  
cufflinks 0.026     Low  
cufflinks 0.013     Low  
cufflinks 1.506        
cufflinks 0.004     Low Low
cufflinks 0.006     Low Low
cufflinks 1.977       High
cufflinks 0.018     Low  
cufflinks 0.908        

0 Strain