Gene : Glyma.07G161700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33510:SF2 - PROTEIN TIC 20-IV, CHLOROPLASTIC Genomic Order:  1617
Name:  ? Glyma.07G161700 Secondary Identifier:  ? PAC:30493133
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G161700 0.5kb upstream 0.5kb upstream 1056 true Chr07: 21307161-21308216 Glycine max
Glyma.07G161700 0.5kb upstream 0.5kb upstream 500 false Chr07: 21307717-21308216 Glycine max
Glyma.07G161700 0.5kb downstream 0.5kb downstream 1056 true Chr07: 21306661-21307716 Glycine max
Glyma.07G161700 0.5kb downstream 0.5kb downstream 500 false Chr07: 21306661-21307160 Glycine max
Glyma.07G161700 1.0kb upstream 1.0kb upstream 1556 true Chr07: 21307161-21308716 Glycine max
Glyma.07G161700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 21307717-21308716 Glycine max
Glyma.07G161700 1.0kb downstream 1.0kb downstream 1556 true Chr07: 21306161-21307716 Glycine max
Glyma.07G161700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 21306161-21307160 Glycine max
Glyma.07G161700 2.0kb upstream 2.0kb upstream 2556 true Chr07: 21307161-21309716 Glycine max
Glyma.07G161700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 21307717-21309716 Glycine max
Glyma.07G161700 2.0kb downstream 2.0kb downstream 2556 true Chr07: 21305161-21307716 Glycine max
Glyma.07G161700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 21305161-21307160 Glycine max
Glyma.07G161700 5.0kb upstream 5.0kb upstream 5556 true Chr07: 21307161-21312716 Glycine max
Glyma.07G161700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 21307717-21312716 Glycine max
Glyma.07G161700 5.0kb downstream 5.0kb downstream 5556 true Chr07: 21302161-21307716 Glycine max
Glyma.07G161700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 21302161-21307160 Glycine max
Glyma.07G161700 10.0kb upstream 10.0kb upstream 10556 true Chr07: 21307161-21317716 Glycine max
Glyma.07G161700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 21307717-21317716 Glycine max
Glyma.07G161700 10.0kb downstream 10.0kb downstream 10556 true Chr07: 21297161-21307716 Glycine max
Glyma.07G161700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 21297161-21307160 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298796 5265 Fabidae View MSA
124037564 5270 Rosid View MSA
123610383 5271 Pentapetalae View MSA
122645003 5272 Eudicot View MSA
122051187 5273 Angiosperm View MSA
121344668 5274 Embryophyte View MSA
123427529 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.159944 0.0 0.676616 Low High
cufflinks 0.00412825 0.0 0.0375251 Low Low
cufflinks 0.0265283 0.0 0.132415 Low  
cufflinks 0.0191628 0.0 0.0996754 Low  
cufflinks 0.00825384 0.0 0.0550651 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.105308 0.0 0.459854 Low High
cufflinks 0.0293754 0.0 0.145472 Low  
cufflinks 0.0219352 0.0 0.112481 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.079     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.061     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain