Gene : Glyma.07G164800 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR24031:SF50 - DEAD/DEAH BOX RNA HELICASE FAMILY PROTEIN Genomic Order:  1648
Name:  ? Glyma.07G164800 Secondary Identifier:  ? PAC:30494929
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G164800 0.5kb upstream 0.5kb upstream 18727 true Chr07: 24318961-24337687 Glycine max
Glyma.07G164800 0.5kb upstream 0.5kb upstream 500 false Chr07: 24337188-24337687 Glycine max
Glyma.07G164800 0.5kb downstream 0.5kb downstream 18727 true Chr07: 24318461-24337187 Glycine max
Glyma.07G164800 0.5kb downstream 0.5kb downstream 500 false Chr07: 24318461-24318960 Glycine max
Glyma.07G164800 1.0kb upstream 1.0kb upstream 19227 true Chr07: 24318961-24338187 Glycine max
Glyma.07G164800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 24337188-24338187 Glycine max
Glyma.07G164800 1.0kb downstream 1.0kb downstream 19227 true Chr07: 24317961-24337187 Glycine max
Glyma.07G164800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 24317961-24318960 Glycine max
Glyma.07G164800 2.0kb upstream 2.0kb upstream 20227 true Chr07: 24318961-24339187 Glycine max
Glyma.07G164800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 24337188-24339187 Glycine max
Glyma.07G164800 2.0kb downstream 2.0kb downstream 20227 true Chr07: 24316961-24337187 Glycine max
Glyma.07G164800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 24316961-24318960 Glycine max
Glyma.07G164800 5.0kb upstream 5.0kb upstream 23227 true Chr07: 24318961-24342187 Glycine max
Glyma.07G164800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 24337188-24342187 Glycine max
Glyma.07G164800 5.0kb downstream 5.0kb downstream 23227 true Chr07: 24313961-24337187 Glycine max
Glyma.07G164800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 24313961-24318960 Glycine max
Glyma.07G164800 10.0kb upstream 10.0kb upstream 28227 true Chr07: 24318961-24347187 Glycine max
Glyma.07G164800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 24337188-24347187 Glycine max
Glyma.07G164800 10.0kb downstream 10.0kb downstream 28227 true Chr07: 24308961-24337187 Glycine max
Glyma.07G164800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 24308961-24318960 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041472 5273 Angiosperm View MSA
122313333 5265 Fabidae View MSA
124038563 5270 Rosid View MSA
123749216 5271 Pentapetalae View MSA
122790449 5272 Eudicot View MSA
121349019 5274 Embryophyte View MSA
123425837 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.78686 0.0 14.2627   High
cufflinks 5.19722 0.0 15.302   High
cufflinks 2.28423 0.0 7.51079    
cufflinks 2.14574 0.0 7.14037    
cufflinks 2.45636 0.0 8.04864    
cufflinks 1.51158 0.0 5.23421   Low
cufflinks 1.86167 0.0 6.31995    
cufflinks 2.04284 0.0 6.8436    
cufflinks 2.22067 0.0 7.36272    
cufflinks 0.248        
cufflinks 0.072       Low
cufflinks 0.28        
cufflinks 0.268        
cufflinks 0.3        
cufflinks 0.105       Low
cufflinks 0.716       High
cufflinks 0.139        
cufflinks 0.394        
cufflinks 0.557        
cufflinks 0.512        
cufflinks 0.077       Low
cufflinks 0.63       High
cufflinks 0.835       High
cufflinks 0.078       Low
cufflinks 0.612       High
cufflinks 0.104       Low

0 Strain