Gene : PhHAL.6G290100 P. hallii HAL v2.1
Defline:  (1 of 1) PTHR23083//PTHR23083:SF397 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED Genomic Order:  2388
Name:  ? PhHAL.6G290100 Secondary Identifier:  ? PAC:40393181
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY-7437 Panicum hallii HAL pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.6G290100 0.5kb upstream 0.5kb upstream 7634 true Chr06: 42352282-42359915 Panicum hallii HAL
PhHAL.6G290100 0.5kb upstream 0.5kb upstream 500 false Chr06: 42352282-42352781 Panicum hallii HAL
PhHAL.6G290100 0.5kb downstream 0.5kb downstream 7634 true Chr06: 42352782-42360415 Panicum hallii HAL
PhHAL.6G290100 0.5kb downstream 0.5kb downstream 500 false Chr06: 42359916-42360415 Panicum hallii HAL
PhHAL.6G290100 1.0kb upstream 1.0kb upstream 8134 true Chr06: 42351782-42359915 Panicum hallii HAL
PhHAL.6G290100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 42351782-42352781 Panicum hallii HAL
PhHAL.6G290100 1.0kb downstream 1.0kb downstream 8134 true Chr06: 42352782-42360915 Panicum hallii HAL
PhHAL.6G290100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 42359916-42360915 Panicum hallii HAL
PhHAL.6G290100 2.0kb upstream 2.0kb upstream 9134 true Chr06: 42350782-42359915 Panicum hallii HAL
PhHAL.6G290100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 42350782-42352781 Panicum hallii HAL
PhHAL.6G290100 2.0kb downstream 2.0kb downstream 9134 true Chr06: 42352782-42361915 Panicum hallii HAL
PhHAL.6G290100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 42359916-42361915 Panicum hallii HAL
PhHAL.6G290100 5.0kb upstream 5.0kb upstream 12134 true Chr06: 42347782-42359915 Panicum hallii HAL
PhHAL.6G290100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 42347782-42352781 Panicum hallii HAL
PhHAL.6G290100 5.0kb downstream 5.0kb downstream 12134 true Chr06: 42352782-42364915 Panicum hallii HAL
PhHAL.6G290100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 42359916-42364915 Panicum hallii HAL
PhHAL.6G290100 10.0kb upstream 10.0kb upstream 17134 true Chr06: 42342782-42359915 Panicum hallii HAL
PhHAL.6G290100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 42342782-42352781 Panicum hallii HAL
PhHAL.6G290100 10.0kb downstream 10.0kb downstream 17134 true Chr06: 42352782-42369915 Panicum hallii HAL
PhHAL.6G290100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 42359916-42369915 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181207 5267 Panicoideae View MSA
124578816 5269 Grass View MSA
122044417 5273 Angiosperm View MSA
121347707 5274 Embryophyte View MSA
123428836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier