Gene : Glyma.07G168900 G. max Wm82.a2.v1
Defline:  (1 of 5) PF07676 - WD40-like Beta Propeller Repeat (PD40) Genomic Order:  1689
Name:  ? Glyma.07G168900 Secondary Identifier:  ? PAC:30493520
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G168900 0.5kb upstream 0.5kb upstream 7472 true Chr07: 28235435-28242906 Glycine max
Glyma.07G168900 0.5kb upstream 0.5kb upstream 500 false Chr07: 28242407-28242906 Glycine max
Glyma.07G168900 0.5kb downstream 0.5kb downstream 7472 true Chr07: 28234935-28242406 Glycine max
Glyma.07G168900 0.5kb downstream 0.5kb downstream 500 false Chr07: 28234935-28235434 Glycine max
Glyma.07G168900 1.0kb upstream 1.0kb upstream 7972 true Chr07: 28235435-28243406 Glycine max
Glyma.07G168900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 28242407-28243406 Glycine max
Glyma.07G168900 1.0kb downstream 1.0kb downstream 7972 true Chr07: 28234435-28242406 Glycine max
Glyma.07G168900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 28234435-28235434 Glycine max
Glyma.07G168900 2.0kb upstream 2.0kb upstream 8972 true Chr07: 28235435-28244406 Glycine max
Glyma.07G168900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 28242407-28244406 Glycine max
Glyma.07G168900 2.0kb downstream 2.0kb downstream 8972 true Chr07: 28233435-28242406 Glycine max
Glyma.07G168900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 28233435-28235434 Glycine max
Glyma.07G168900 5.0kb upstream 5.0kb upstream 11972 true Chr07: 28235435-28247406 Glycine max
Glyma.07G168900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 28242407-28247406 Glycine max
Glyma.07G168900 5.0kb downstream 5.0kb downstream 11972 true Chr07: 28230435-28242406 Glycine max
Glyma.07G168900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 28230435-28235434 Glycine max
Glyma.07G168900 10.0kb upstream 10.0kb upstream 16972 true Chr07: 28235435-28252406 Glycine max
Glyma.07G168900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 28242407-28252406 Glycine max
Glyma.07G168900 10.0kb downstream 10.0kb downstream 16972 true Chr07: 28225435-28242406 Glycine max
Glyma.07G168900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 28225435-28235434 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304143 5265 Fabidae View MSA
124062659 5270 Rosid View MSA
123740244 5271 Pentapetalae View MSA
122792271 5272 Eudicot View MSA
122050472 5273 Angiosperm View MSA
121347738 5274 Embryophyte View MSA
123424154 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.8204 0.0 39.3404   High
cufflinks 3.34035 0.0 12.1145    
cufflinks 20.0311 0.0 63.0444   High
cufflinks 2.67833 0.0 10.183    
cufflinks 7.57134 0.0 22.5537    
cufflinks 4.21284 0.0 14.2879    
cufflinks 2.53334 0.0 9.51027    
cufflinks 1.59538 0.0 7.09005   Low
cufflinks 7.58799 0.0 22.6065    
cufflinks 0.889       Low
cufflinks 7.097     High High
cufflinks 2.684        
cufflinks 2.389        
cufflinks 2.398        
cufflinks 6.703     High High
cufflinks 3.027        
cufflinks 0.77       Low
cufflinks 1.206       Low
cufflinks 2.777        
cufflinks 2.894        
cufflinks 5.827     High High
cufflinks 1.712        
cufflinks 1.728        
cufflinks 2.895        
cufflinks 2.995        
cufflinks 4.876        

0 Strain