Gene : Glyma.07G169100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10891//PTHR10891:SF631 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Genomic Order:  1691
Name:  ? Glyma.07G169100 Secondary Identifier:  ? PAC:30492058
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G169100 0.5kb upstream 0.5kb upstream 2501 true Chr07: 28509830-28512330 Glycine max
Glyma.07G169100 0.5kb upstream 0.5kb upstream 500 false Chr07: 28511831-28512330 Glycine max
Glyma.07G169100 0.5kb downstream 0.5kb downstream 2501 true Chr07: 28509330-28511830 Glycine max
Glyma.07G169100 0.5kb downstream 0.5kb downstream 500 false Chr07: 28509330-28509829 Glycine max
Glyma.07G169100 1.0kb upstream 1.0kb upstream 3001 true Chr07: 28509830-28512830 Glycine max
Glyma.07G169100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 28511831-28512830 Glycine max
Glyma.07G169100 1.0kb downstream 1.0kb downstream 3001 true Chr07: 28508830-28511830 Glycine max
Glyma.07G169100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 28508830-28509829 Glycine max
Glyma.07G169100 2.0kb upstream 2.0kb upstream 4001 true Chr07: 28509830-28513830 Glycine max
Glyma.07G169100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 28511831-28513830 Glycine max
Glyma.07G169100 2.0kb downstream 2.0kb downstream 4001 true Chr07: 28507830-28511830 Glycine max
Glyma.07G169100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 28507830-28509829 Glycine max
Glyma.07G169100 5.0kb upstream 5.0kb upstream 7001 true Chr07: 28509830-28516830 Glycine max
Glyma.07G169100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 28511831-28516830 Glycine max
Glyma.07G169100 5.0kb downstream 5.0kb downstream 7001 true Chr07: 28504830-28511830 Glycine max
Glyma.07G169100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 28504830-28509829 Glycine max
Glyma.07G169100 10.0kb upstream 10.0kb upstream 12001 true Chr07: 28509830-28521830 Glycine max
Glyma.07G169100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 28511831-28521830 Glycine max
Glyma.07G169100 10.0kb downstream 10.0kb downstream 12001 true Chr07: 28499830-28511830 Glycine max
Glyma.07G169100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 28499830-28509829 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312728 5265 Fabidae View MSA
124050277 5270 Rosid View MSA
123736874 5271 Pentapetalae View MSA
122791196 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0280398 0.0 0.12681 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 17.7114 0.0 49.3447   High
cufflinks 0.0790084 0.0 0.329104 Low  
cufflinks 0.0228081 0.0 0.104784 Low  
cufflinks 0.0523856 0.0 0.2245 Low  
cufflinks 0.0502625 0.0 0.216476 Low  
cufflinks 0.0285974 0.0 0.129431 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.198        
cufflinks 2.363       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low Low
cufflinks 1.806       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.049     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.147        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.05     Low  

0 Strain