Gene : Glyma.07G157800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11071:SF200 - CYCLOPHILIN-LIKE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FAMILY PROTEIN-RELATED Genomic Order:  1578
Name:  ? Glyma.07G157800 Secondary Identifier:  ? PAC:30493875
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G157800 0.5kb upstream 0.5kb upstream 6090 true Chr07: 19487788-19493877 Glycine max
Glyma.07G157800 0.5kb upstream 0.5kb upstream 500 false Chr07: 19487788-19488287 Glycine max
Glyma.07G157800 0.5kb downstream 0.5kb downstream 6090 true Chr07: 19488288-19494377 Glycine max
Glyma.07G157800 0.5kb downstream 0.5kb downstream 500 false Chr07: 19493878-19494377 Glycine max
Glyma.07G157800 1.0kb upstream 1.0kb upstream 6590 true Chr07: 19487288-19493877 Glycine max
Glyma.07G157800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 19487288-19488287 Glycine max
Glyma.07G157800 1.0kb downstream 1.0kb downstream 6590 true Chr07: 19488288-19494877 Glycine max
Glyma.07G157800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 19493878-19494877 Glycine max
Glyma.07G157800 2.0kb upstream 2.0kb upstream 7590 true Chr07: 19486288-19493877 Glycine max
Glyma.07G157800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 19486288-19488287 Glycine max
Glyma.07G157800 2.0kb downstream 2.0kb downstream 7590 true Chr07: 19488288-19495877 Glycine max
Glyma.07G157800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 19493878-19495877 Glycine max
Glyma.07G157800 5.0kb upstream 5.0kb upstream 10590 true Chr07: 19483288-19493877 Glycine max
Glyma.07G157800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 19483288-19488287 Glycine max
Glyma.07G157800 5.0kb downstream 5.0kb downstream 10590 true Chr07: 19488288-19498877 Glycine max
Glyma.07G157800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 19493878-19498877 Glycine max
Glyma.07G157800 10.0kb upstream 10.0kb upstream 15590 true Chr07: 19478288-19493877 Glycine max
Glyma.07G157800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 19478288-19488287 Glycine max
Glyma.07G157800 10.0kb downstream 10.0kb downstream 15590 true Chr07: 19488288-19503877 Glycine max
Glyma.07G157800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 19493878-19503877 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296591 5265 Fabidae View MSA
124066155 5270 Rosid View MSA
123744610 5271 Pentapetalae View MSA
122791251 5272 Eudicot View MSA
122046189 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121350485 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.658543 0.0 4.41046    
cufflinks 0.831368 0.0 6.52229    
cufflinks 0.425391 0.0 2.96288    
cufflinks 0.281143 0.0 1.38954    
cufflinks 0.414476 0.0 1.97047    
cufflinks 1.34664 0.0 8.0479   High
cufflinks 0.34882 0.0 1.7639    
cufflinks 1.7378 0.0 9.54975   High
cufflinks 0.236806 0.0 0.921126 Low Low
cufflinks 0.098     Low  
cufflinks 0.031     Low  
cufflinks 0.033     Low  
cufflinks 0.059     Low  
cufflinks 0.054     Low  
cufflinks 0.007     Low Low
cufflinks 0.137        
cufflinks 0.064     Low  
cufflinks 0.05     Low  
cufflinks 0.13        
cufflinks 0.122        
cufflinks 0.017     Low Low
cufflinks 0.11        
cufflinks 0.269       High
cufflinks 0.035     Low  
cufflinks 0.134        
cufflinks 0.022     Low Low

0 Strain