Gene : Glyma.07G158100 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR11638//PTHR11638:SF106 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  1581
Name:  ? Glyma.07G158100 Secondary Identifier:  ? PAC:30494342
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G158100 0.5kb upstream 0.5kb upstream 2297 true Chr07: 19640835-19643131 Glycine max
Glyma.07G158100 0.5kb upstream 0.5kb upstream 500 false Chr07: 19642632-19643131 Glycine max
Glyma.07G158100 0.5kb downstream 0.5kb downstream 2297 true Chr07: 19640335-19642631 Glycine max
Glyma.07G158100 0.5kb downstream 0.5kb downstream 500 false Chr07: 19640335-19640834 Glycine max
Glyma.07G158100 1.0kb upstream 1.0kb upstream 2797 true Chr07: 19640835-19643631 Glycine max
Glyma.07G158100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 19642632-19643631 Glycine max
Glyma.07G158100 1.0kb downstream 1.0kb downstream 2797 true Chr07: 19639835-19642631 Glycine max
Glyma.07G158100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 19639835-19640834 Glycine max
Glyma.07G158100 2.0kb upstream 2.0kb upstream 3797 true Chr07: 19640835-19644631 Glycine max
Glyma.07G158100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 19642632-19644631 Glycine max
Glyma.07G158100 2.0kb downstream 2.0kb downstream 3797 true Chr07: 19638835-19642631 Glycine max
Glyma.07G158100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 19638835-19640834 Glycine max
Glyma.07G158100 5.0kb upstream 5.0kb upstream 6797 true Chr07: 19640835-19647631 Glycine max
Glyma.07G158100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 19642632-19647631 Glycine max
Glyma.07G158100 5.0kb downstream 5.0kb downstream 6797 true Chr07: 19635835-19642631 Glycine max
Glyma.07G158100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 19635835-19640834 Glycine max
Glyma.07G158100 10.0kb upstream 10.0kb upstream 11797 true Chr07: 19640835-19652631 Glycine max
Glyma.07G158100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 19642632-19652631 Glycine max
Glyma.07G158100 10.0kb downstream 10.0kb downstream 11797 true Chr07: 19630835-19642631 Glycine max
Glyma.07G158100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 19630835-19640834 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250243 5265 Fabidae View MSA
124039412 5270 Rosid View MSA
123611304 5271 Pentapetalae View MSA
122645875 5272 Eudicot View MSA
122050456 5273 Angiosperm View MSA
121347252 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0311876 0.0 0.132906 Low  
cufflinks 0.0750456 0.0 0.302861 Low High
cufflinks 0.0281169 0.0 0.120302 Low  
cufflinks 0.108357 0.0 0.430973 Low High
cufflinks 0.0402137 0.0 0.168142 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0411091 0.0 0.171481 Low  
cufflinks 0.0299867 0.0 0.127869 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain