Gene : Glyma.07G149600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Genomic Order:  1496
Name:  ? Glyma.07G149600 Secondary Identifier:  ? PAC:30493029
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G149600 0.5kb upstream 0.5kb upstream 4825 true Chr07: 17970179-17975003 Glycine max
Glyma.07G149600 0.5kb upstream 0.5kb upstream 500 false Chr07: 17974504-17975003 Glycine max
Glyma.07G149600 0.5kb downstream 0.5kb downstream 4825 true Chr07: 17969679-17974503 Glycine max
Glyma.07G149600 0.5kb downstream 0.5kb downstream 500 false Chr07: 17969679-17970178 Glycine max
Glyma.07G149600 1.0kb upstream 1.0kb upstream 5325 true Chr07: 17970179-17975503 Glycine max
Glyma.07G149600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 17974504-17975503 Glycine max
Glyma.07G149600 1.0kb downstream 1.0kb downstream 5325 true Chr07: 17969179-17974503 Glycine max
Glyma.07G149600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 17969179-17970178 Glycine max
Glyma.07G149600 2.0kb upstream 2.0kb upstream 6325 true Chr07: 17970179-17976503 Glycine max
Glyma.07G149600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 17974504-17976503 Glycine max
Glyma.07G149600 2.0kb downstream 2.0kb downstream 6325 true Chr07: 17968179-17974503 Glycine max
Glyma.07G149600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 17968179-17970178 Glycine max
Glyma.07G149600 5.0kb upstream 5.0kb upstream 9325 true Chr07: 17970179-17979503 Glycine max
Glyma.07G149600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 17974504-17979503 Glycine max
Glyma.07G149600 5.0kb downstream 5.0kb downstream 9325 true Chr07: 17965179-17974503 Glycine max
Glyma.07G149600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 17965179-17970178 Glycine max
Glyma.07G149600 10.0kb upstream 10.0kb upstream 14325 true Chr07: 17970179-17984503 Glycine max
Glyma.07G149600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 17974504-17984503 Glycine max
Glyma.07G149600 10.0kb downstream 10.0kb downstream 14325 true Chr07: 17960179-17974503 Glycine max
Glyma.07G149600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 17960179-17970178 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299639 5265 Fabidae View MSA
124065189 5270 Rosid View MSA
123739014 5271 Pentapetalae View MSA
122792056 5272 Eudicot View MSA
122048075 5273 Angiosperm View MSA
121310844 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 309.329 0.0 4536.44 High  
cufflinks 351.563 0.0 6015.27 High  
cufflinks 723.186 0.0 25510.5 High High
cufflinks 249.2 0.0 3281.27 High  
cufflinks 15.6237 0.0 62.316    
cufflinks 5.57061 0.0 23.6329   Low
cufflinks 18.7226 0.0 95.5988    
cufflinks 130.941 0.0 1128.93 High  
cufflinks 3.29318 0.0 13.842   Low
cufflinks 23.553     High  
cufflinks 0.061       Low
cufflinks 52.414     High High
cufflinks 0.246        
cufflinks 0.184        
cufflinks 0.054       Low
cufflinks 4.527        
cufflinks 0.168        
cufflinks 38.284     High High
cufflinks 52.889     High High
cufflinks 12.568     High  
cufflinks 0.092       Low
cufflinks 14.112     High  
cufflinks 43.987     High High
cufflinks 0.084       Low
cufflinks 10.914     High  
cufflinks 0.072       Low

0 Strain