Gene : Glyma.07G205800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12565//PTHR12565:SF181 - STEROL REGULATORY ELEMENT-BINDING PROTEIN Genomic Order:  2058
Name:  ? Glyma.07G205800 Secondary Identifier:  ? PAC:30493630
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G205800 0.5kb upstream 0.5kb upstream 4591 true Chr07: 37482567-37487157 Glycine max
Glyma.07G205800 0.5kb upstream 0.5kb upstream 500 false Chr07: 37486658-37487157 Glycine max
Glyma.07G205800 0.5kb downstream 0.5kb downstream 4591 true Chr07: 37482067-37486657 Glycine max
Glyma.07G205800 0.5kb downstream 0.5kb downstream 500 false Chr07: 37482067-37482566 Glycine max
Glyma.07G205800 1.0kb upstream 1.0kb upstream 5091 true Chr07: 37482567-37487657 Glycine max
Glyma.07G205800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37486658-37487657 Glycine max
Glyma.07G205800 1.0kb downstream 1.0kb downstream 5091 true Chr07: 37481567-37486657 Glycine max
Glyma.07G205800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37481567-37482566 Glycine max
Glyma.07G205800 2.0kb upstream 2.0kb upstream 6091 true Chr07: 37482567-37488657 Glycine max
Glyma.07G205800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37486658-37488657 Glycine max
Glyma.07G205800 2.0kb downstream 2.0kb downstream 6091 true Chr07: 37480567-37486657 Glycine max
Glyma.07G205800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37480567-37482566 Glycine max
Glyma.07G205800 5.0kb upstream 5.0kb upstream 9091 true Chr07: 37482567-37491657 Glycine max
Glyma.07G205800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37486658-37491657 Glycine max
Glyma.07G205800 5.0kb downstream 5.0kb downstream 9091 true Chr07: 37477567-37486657 Glycine max
Glyma.07G205800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37477567-37482566 Glycine max
Glyma.07G205800 10.0kb upstream 10.0kb upstream 14091 true Chr07: 37482567-37496657 Glycine max
Glyma.07G205800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37486658-37496657 Glycine max
Glyma.07G205800 10.0kb downstream 10.0kb downstream 14091 true Chr07: 37472567-37486657 Glycine max
Glyma.07G205800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37472567-37482566 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302460 5265 Fabidae View MSA
124070822 5270 Rosid View MSA
123748515 5271 Pentapetalae View MSA
122793981 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.4349 0.0 4.925    
cufflinks 0.309069 0.0 1.16833   Low
cufflinks 7.85211 0.0 21.6311    
cufflinks 0.515094 0.0 1.89937    
cufflinks 4.05186 0.0 12.1149    
cufflinks 33.0561 0.0 89.8442 High High
cufflinks 0.418918 0.0 1.56375   Low
cufflinks 1.76768 0.0 5.89114    
cufflinks 4.58037 0.0 13.4194    
cufflinks 0.489        
cufflinks 2.894       High
cufflinks 2.316        
cufflinks 4.229       High
cufflinks 1.008        
cufflinks 1.506        
cufflinks 0.129       Low
cufflinks 1.16        
cufflinks 0.424        
cufflinks 0.274        
cufflinks 0.079     Low Low
cufflinks 1.921        
cufflinks 0.091     Low Low
cufflinks 0.118       Low
cufflinks 3.521       High
cufflinks 0.109       Low
cufflinks 2.382        

0 Strain