Gene : Glyma.07G208600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR22999:SF23 - SORTING NEXIN-16 Genomic Order:  2086
Name:  ? Glyma.07G208600 Secondary Identifier:  ? PAC:30494979
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G208600 0.5kb upstream 0.5kb upstream 20131 true Chr07: 37825191-37845321 Glycine max
Glyma.07G208600 0.5kb upstream 0.5kb upstream 500 false Chr07: 37844822-37845321 Glycine max
Glyma.07G208600 0.5kb downstream 0.5kb downstream 20131 true Chr07: 37824691-37844821 Glycine max
Glyma.07G208600 0.5kb downstream 0.5kb downstream 500 false Chr07: 37824691-37825190 Glycine max
Glyma.07G208600 1.0kb upstream 1.0kb upstream 20631 true Chr07: 37825191-37845821 Glycine max
Glyma.07G208600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37844822-37845821 Glycine max
Glyma.07G208600 1.0kb downstream 1.0kb downstream 20631 true Chr07: 37824191-37844821 Glycine max
Glyma.07G208600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37824191-37825190 Glycine max
Glyma.07G208600 2.0kb upstream 2.0kb upstream 21631 true Chr07: 37825191-37846821 Glycine max
Glyma.07G208600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37844822-37846821 Glycine max
Glyma.07G208600 2.0kb downstream 2.0kb downstream 21631 true Chr07: 37823191-37844821 Glycine max
Glyma.07G208600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37823191-37825190 Glycine max
Glyma.07G208600 5.0kb upstream 5.0kb upstream 24631 true Chr07: 37825191-37849821 Glycine max
Glyma.07G208600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37844822-37849821 Glycine max
Glyma.07G208600 5.0kb downstream 5.0kb downstream 24631 true Chr07: 37820191-37844821 Glycine max
Glyma.07G208600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37820191-37825190 Glycine max
Glyma.07G208600 10.0kb upstream 10.0kb upstream 29631 true Chr07: 37825191-37854821 Glycine max
Glyma.07G208600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37844822-37854821 Glycine max
Glyma.07G208600 10.0kb downstream 10.0kb downstream 29631 true Chr07: 37815191-37844821 Glycine max
Glyma.07G208600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37815191-37825190 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303562 5265 Fabidae View MSA
124063177 5270 Rosid View MSA
123744623 5271 Pentapetalae View MSA
122786474 5272 Eudicot View MSA
122049546 5273 Angiosperm View MSA
121349142 5274 Embryophyte View MSA
123426415 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.17861 0.0 15.1768    
cufflinks 3.23092 0.0 10.6175   Low
cufflinks 4.60982 0.0 16.4071   High
cufflinks 3.91212 0.0 14.5651    
cufflinks 3.19381 0.0 12.3516   Low
cufflinks 4.09277 0.0 14.8881    
cufflinks 4.07332 0.0 12.9001    
cufflinks 3.65174 0.0 13.567    
cufflinks 3.99667 0.0 14.6691    
cufflinks 0.374       Low
cufflinks 0.598        
cufflinks 0.604        
cufflinks 0.531        
cufflinks 0.41       Low
cufflinks 0.587        
cufflinks 0.584        
cufflinks 0.399       Low
cufflinks 0.668        
cufflinks 0.519        
cufflinks 0.646        
cufflinks 0.898       High
cufflinks 0.654        
cufflinks 0.449       Low
cufflinks 0.662        
cufflinks 0.588        
cufflinks 0.617        

0 Strain