Gene : Glyma.07G195000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10639:SF7 - CLATHRIN LIGHT CHAIN Genomic Order:  1950
Name:  ? Glyma.07G195000 Secondary Identifier:  ? PAC:30491769
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G195000 0.5kb upstream 0.5kb upstream 3334 true Chr07: 36346194-36349527 Glycine max
Glyma.07G195000 0.5kb upstream 0.5kb upstream 500 false Chr07: 36346194-36346693 Glycine max
Glyma.07G195000 0.5kb downstream 0.5kb downstream 3334 true Chr07: 36346694-36350027 Glycine max
Glyma.07G195000 0.5kb downstream 0.5kb downstream 500 false Chr07: 36349528-36350027 Glycine max
Glyma.07G195000 1.0kb upstream 1.0kb upstream 3834 true Chr07: 36345694-36349527 Glycine max
Glyma.07G195000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36345694-36346693 Glycine max
Glyma.07G195000 1.0kb downstream 1.0kb downstream 3834 true Chr07: 36346694-36350527 Glycine max
Glyma.07G195000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36349528-36350527 Glycine max
Glyma.07G195000 2.0kb upstream 2.0kb upstream 4834 true Chr07: 36344694-36349527 Glycine max
Glyma.07G195000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36344694-36346693 Glycine max
Glyma.07G195000 2.0kb downstream 2.0kb downstream 4834 true Chr07: 36346694-36351527 Glycine max
Glyma.07G195000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36349528-36351527 Glycine max
Glyma.07G195000 5.0kb upstream 5.0kb upstream 7834 true Chr07: 36341694-36349527 Glycine max
Glyma.07G195000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36341694-36346693 Glycine max
Glyma.07G195000 5.0kb downstream 5.0kb downstream 7834 true Chr07: 36346694-36354527 Glycine max
Glyma.07G195000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36349528-36354527 Glycine max
Glyma.07G195000 10.0kb upstream 10.0kb upstream 12834 true Chr07: 36336694-36349527 Glycine max
Glyma.07G195000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36336694-36346693 Glycine max
Glyma.07G195000 10.0kb downstream 10.0kb downstream 12834 true Chr07: 36346694-36359527 Glycine max
Glyma.07G195000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36349528-36359527 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296653 5265 Fabidae View MSA
124061601 5270 Rosid View MSA
123752626 5271 Pentapetalae View MSA
122796141 5272 Eudicot View MSA
122042029 5273 Angiosperm View MSA
121347289 5274 Embryophyte View MSA
123426291 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.2314 0.0 51.4015    
cufflinks 25.7368 0.0 68.6793 High  
cufflinks 12.2651 0.0 33.5436   Low
cufflinks 36.1465 0.0 97.3936 High  
cufflinks 47.3996 0.0 130.256 High  
cufflinks 45.5719 0.0 124.499 High  
cufflinks 19.8283 0.0 52.973    
cufflinks 66.639 0.0 188.812 High High
cufflinks 26.9055 0.0 71.8488 High  
cufflinks 33.027     High High
cufflinks 8.473     High  
cufflinks 6.936       Low
cufflinks 27.332     High High
cufflinks 30.005     High High
cufflinks 5.858     High Low
cufflinks 13.008     High  
cufflinks 12.974     High  
cufflinks 12.471     High  
cufflinks 17.98     High  
cufflinks 8.994     High  
cufflinks 13.383     High  
cufflinks 10.983     High  
cufflinks 14.136     High  
cufflinks 10.875     High  
cufflinks 9.819     High  
cufflinks 11.953     High  

0 Strain