Gene : Glyma.07G197100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31579:SF11 - EXPRESSED PROTEIN Genomic Order:  1971
Name:  ? Glyma.07G197100 Secondary Identifier:  ? PAC:30494640
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G197100 0.5kb upstream 0.5kb upstream 3238 true Chr07: 36545831-36549068 Glycine max
Glyma.07G197100 0.5kb upstream 0.5kb upstream 500 false Chr07: 36545831-36546330 Glycine max
Glyma.07G197100 0.5kb downstream 0.5kb downstream 3238 true Chr07: 36546331-36549568 Glycine max
Glyma.07G197100 0.5kb downstream 0.5kb downstream 500 false Chr07: 36549069-36549568 Glycine max
Glyma.07G197100 1.0kb upstream 1.0kb upstream 3738 true Chr07: 36545331-36549068 Glycine max
Glyma.07G197100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36545331-36546330 Glycine max
Glyma.07G197100 1.0kb downstream 1.0kb downstream 3738 true Chr07: 36546331-36550068 Glycine max
Glyma.07G197100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36549069-36550068 Glycine max
Glyma.07G197100 2.0kb upstream 2.0kb upstream 4738 true Chr07: 36544331-36549068 Glycine max
Glyma.07G197100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36544331-36546330 Glycine max
Glyma.07G197100 2.0kb downstream 2.0kb downstream 4738 true Chr07: 36546331-36551068 Glycine max
Glyma.07G197100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36549069-36551068 Glycine max
Glyma.07G197100 5.0kb upstream 5.0kb upstream 7738 true Chr07: 36541331-36549068 Glycine max
Glyma.07G197100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36541331-36546330 Glycine max
Glyma.07G197100 5.0kb downstream 5.0kb downstream 7738 true Chr07: 36546331-36554068 Glycine max
Glyma.07G197100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36549069-36554068 Glycine max
Glyma.07G197100 10.0kb upstream 10.0kb upstream 12738 true Chr07: 36536331-36549068 Glycine max
Glyma.07G197100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36536331-36546330 Glycine max
Glyma.07G197100 10.0kb downstream 10.0kb downstream 12738 true Chr07: 36546331-36559068 Glycine max
Glyma.07G197100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36549069-36559068 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298563 5265 Fabidae View MSA
124071276 5270 Rosid View MSA
123751272 5271 Pentapetalae View MSA
122785688 5272 Eudicot View MSA
122045708 5273 Angiosperm View MSA
123429021 5275 Viridiplantae View MSA
121310489 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.1202 0.0 3.99789    
cufflinks 0.0150624 0.0 0.0683084 Low Low
cufflinks 0.247568 0.0 0.95354    
cufflinks 0.482742 0.0 1.80646    
cufflinks 5.08869 0.0 15.1766   High
cufflinks 3.53755 0.0 11.1157    
cufflinks 0.013586 0.0 0.0622266 Low Low
cufflinks 0.12121 0.0 0.480301 Low  
cufflinks 4.60581 0.0 13.9156   High
cufflinks 0.739        
cufflinks 402.854     High High
cufflinks 1.075        
cufflinks 3.182        
cufflinks 3.407        
cufflinks 888.626     High High
cufflinks 2.422        
cufflinks 6.169     High  
cufflinks 1.326        
cufflinks 0.198       Low
cufflinks 1.38        
cufflinks 304.301     High High
cufflinks 0.15       Low
cufflinks 0.092     Low Low
cufflinks 142.112     High High
cufflinks 3.888        
cufflinks 145.54     High High

0 Strain