Gene : Glyma.07G197900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR15818 - G PATCH AND KOW-CONTAINING Genomic Order:  1979
Name:  ? Glyma.07G197900 Secondary Identifier:  ? PAC:30495016
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G197900 0.5kb upstream 0.5kb upstream 2464 true Chr07: 36608175-36610638 Glycine max
Glyma.07G197900 0.5kb upstream 0.5kb upstream 500 false Chr07: 36610139-36610638 Glycine max
Glyma.07G197900 0.5kb downstream 0.5kb downstream 2464 true Chr07: 36607675-36610138 Glycine max
Glyma.07G197900 0.5kb downstream 0.5kb downstream 500 false Chr07: 36607675-36608174 Glycine max
Glyma.07G197900 1.0kb upstream 1.0kb upstream 2964 true Chr07: 36608175-36611138 Glycine max
Glyma.07G197900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36610139-36611138 Glycine max
Glyma.07G197900 1.0kb downstream 1.0kb downstream 2964 true Chr07: 36607175-36610138 Glycine max
Glyma.07G197900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36607175-36608174 Glycine max
Glyma.07G197900 2.0kb upstream 2.0kb upstream 3964 true Chr07: 36608175-36612138 Glycine max
Glyma.07G197900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36610139-36612138 Glycine max
Glyma.07G197900 2.0kb downstream 2.0kb downstream 3964 true Chr07: 36606175-36610138 Glycine max
Glyma.07G197900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36606175-36608174 Glycine max
Glyma.07G197900 5.0kb upstream 5.0kb upstream 6964 true Chr07: 36608175-36615138 Glycine max
Glyma.07G197900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36610139-36615138 Glycine max
Glyma.07G197900 5.0kb downstream 5.0kb downstream 6964 true Chr07: 36603175-36610138 Glycine max
Glyma.07G197900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36603175-36608174 Glycine max
Glyma.07G197900 10.0kb upstream 10.0kb upstream 11964 true Chr07: 36608175-36620138 Glycine max
Glyma.07G197900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36610139-36620138 Glycine max
Glyma.07G197900 10.0kb downstream 10.0kb downstream 11964 true Chr07: 36598175-36610138 Glycine max
Glyma.07G197900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36598175-36608174 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303537 5265 Fabidae View MSA
124064997 5270 Rosid View MSA
123746518 5271 Pentapetalae View MSA
122790026 5272 Eudicot View MSA
122046312 5273 Angiosperm View MSA
121346621 5274 Embryophyte View MSA
123426074 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.58561 0.0 25.6865    
cufflinks 7.94199 0.0 21.4828    
cufflinks 12.5306 0.0 33.4329   High
cufflinks 8.12012 0.0 21.9103    
cufflinks 7.50576 0.0 20.3097    
cufflinks 6.73003 0.0 18.3582    
cufflinks 6.23498 0.0 17.0657   Low
cufflinks 9.86064 0.0 26.4154    
cufflinks 7.25455 0.0 19.7046    
cufflinks 14.293     High  
cufflinks 6.366     High Low
cufflinks 16.991     High High
cufflinks 11.018     High  
cufflinks 12.571     High  
cufflinks 6.051     High Low
cufflinks 15.296     High  
cufflinks 11.142     High  
cufflinks 15.276     High  
cufflinks 13.735     High  
cufflinks 16.141     High  
cufflinks 7.373     High Low
cufflinks 17.153     High High
cufflinks 15.463     High  
cufflinks 8.822     High  
cufflinks 14.936     High  
cufflinks 9.564     High  

0 Strain