Gene : Glyma.07G199800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33199:SF8 - MACPF DOMAIN-CONTAINING PROTEIN NSL1 Genomic Order:  1998
Name:  ? Glyma.07G199800 Secondary Identifier:  ? PAC:30494293
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G199800 0.5kb upstream 0.5kb upstream 6555 true Chr07: 36845030-36851584 Glycine max
Glyma.07G199800 0.5kb upstream 0.5kb upstream 500 false Chr07: 36845030-36845529 Glycine max
Glyma.07G199800 0.5kb downstream 0.5kb downstream 6555 true Chr07: 36845530-36852084 Glycine max
Glyma.07G199800 0.5kb downstream 0.5kb downstream 500 false Chr07: 36851585-36852084 Glycine max
Glyma.07G199800 1.0kb upstream 1.0kb upstream 7055 true Chr07: 36844530-36851584 Glycine max
Glyma.07G199800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36844530-36845529 Glycine max
Glyma.07G199800 1.0kb downstream 1.0kb downstream 7055 true Chr07: 36845530-36852584 Glycine max
Glyma.07G199800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36851585-36852584 Glycine max
Glyma.07G199800 2.0kb upstream 2.0kb upstream 8055 true Chr07: 36843530-36851584 Glycine max
Glyma.07G199800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36843530-36845529 Glycine max
Glyma.07G199800 2.0kb downstream 2.0kb downstream 8055 true Chr07: 36845530-36853584 Glycine max
Glyma.07G199800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36851585-36853584 Glycine max
Glyma.07G199800 5.0kb upstream 5.0kb upstream 11055 true Chr07: 36840530-36851584 Glycine max
Glyma.07G199800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36840530-36845529 Glycine max
Glyma.07G199800 5.0kb downstream 5.0kb downstream 11055 true Chr07: 36845530-36856584 Glycine max
Glyma.07G199800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36851585-36856584 Glycine max
Glyma.07G199800 10.0kb upstream 10.0kb upstream 16055 true Chr07: 36835530-36851584 Glycine max
Glyma.07G199800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36835530-36845529 Glycine max
Glyma.07G199800 10.0kb downstream 10.0kb downstream 16055 true Chr07: 36845530-36861584 Glycine max
Glyma.07G199800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36851585-36861584 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303313 5265 Fabidae View MSA
124061147 5270 Rosid View MSA
123738184 5271 Pentapetalae View MSA
122791371 5272 Eudicot View MSA
122048917 5273 Angiosperm View MSA
121311170 5274 Embryophyte View MSA
123348503 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.5217 0.0 17.7808   High
cufflinks 0.465132 0.0 1.69118    
cufflinks 2.82601 0.0 8.37862    
cufflinks 0.0830796 0.0 0.326748 Low Low
cufflinks 1.12961 0.0 3.81891    
cufflinks 6.68046 0.0 18.1801   High
cufflinks 0.525185 0.0 1.89701    
cufflinks 0.485699 0.0 1.75982    
cufflinks 1.23541 0.0 4.12428    
cufflinks 11.346     High  
cufflinks 18.102     High High
cufflinks 4.619        
cufflinks 3.538        
cufflinks 0.287       Low
cufflinks 4.628        
cufflinks 1.691        
cufflinks 31.192     High High
cufflinks 3.012        
cufflinks 0.363       Low
cufflinks 1.287        
cufflinks 8.03     High  
cufflinks 0.96        
cufflinks 2.05        
cufflinks 8.994     High  
cufflinks 1.472        
cufflinks 15.372     High High

0 Strain