Gene : Glyma.07G199900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10666:SF150 - POLYUBIQUITIN 3 Genomic Order:  1999
Name:  ? Glyma.07G199900 Secondary Identifier:  ? PAC:30492405
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G199900 0.5kb upstream 0.5kb upstream 3415 true Chr07: 36853878-36857292 Glycine max
Glyma.07G199900 0.5kb upstream 0.5kb upstream 500 false Chr07: 36853878-36854377 Glycine max
Glyma.07G199900 0.5kb downstream 0.5kb downstream 3415 true Chr07: 36854378-36857792 Glycine max
Glyma.07G199900 0.5kb downstream 0.5kb downstream 500 false Chr07: 36857293-36857792 Glycine max
Glyma.07G199900 1.0kb upstream 1.0kb upstream 3915 true Chr07: 36853378-36857292 Glycine max
Glyma.07G199900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36853378-36854377 Glycine max
Glyma.07G199900 1.0kb downstream 1.0kb downstream 3915 true Chr07: 36854378-36858292 Glycine max
Glyma.07G199900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36857293-36858292 Glycine max
Glyma.07G199900 2.0kb upstream 2.0kb upstream 4915 true Chr07: 36852378-36857292 Glycine max
Glyma.07G199900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36852378-36854377 Glycine max
Glyma.07G199900 2.0kb downstream 2.0kb downstream 4915 true Chr07: 36854378-36859292 Glycine max
Glyma.07G199900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36857293-36859292 Glycine max
Glyma.07G199900 5.0kb upstream 5.0kb upstream 7915 true Chr07: 36849378-36857292 Glycine max
Glyma.07G199900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36849378-36854377 Glycine max
Glyma.07G199900 5.0kb downstream 5.0kb downstream 7915 true Chr07: 36854378-36862292 Glycine max
Glyma.07G199900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36857293-36862292 Glycine max
Glyma.07G199900 10.0kb upstream 10.0kb upstream 12915 true Chr07: 36844378-36857292 Glycine max
Glyma.07G199900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36844378-36854377 Glycine max
Glyma.07G199900 10.0kb downstream 10.0kb downstream 12915 true Chr07: 36854378-36867292 Glycine max
Glyma.07G199900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36857293-36867292 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029747 5273 Angiosperm View MSA
124071531 5270 Rosid View MSA
122314501 5265 Fabidae View MSA
123752540 5271 Pentapetalae View MSA
122796500 5272 Eudicot View MSA
121351277 5274 Embryophyte View MSA
123428084 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 113.814 0.0 707.57 High  
cufflinks 46.2162 0.0 194.175 High Low
cufflinks 273.347 0.0 3155.08 High High
cufflinks 44.0604 0.0 183.605 High Low
cufflinks 121.929 0.0 787.432 High  
cufflinks 254.753 0.0 2745.31 High High
cufflinks 61.7333 0.0 287.322 High  
cufflinks 98.2251 0.0 572.777 High  
cufflinks 121.346 0.0 785.856 High  
cufflinks 15.875     High  
cufflinks 51.406     High  
cufflinks 41.412     High  
cufflinks 32.383     High  
cufflinks 15.979     High  
cufflinks 113.851     High High
cufflinks 16.713     High  
cufflinks 70.135     High High
cufflinks 15.486     High  
cufflinks 11.734     High  
cufflinks 10.121     High Low
cufflinks 47.867     High  
cufflinks 11.477     High Low
cufflinks 10.6     High Low
cufflinks 46.126     High  
cufflinks 13.266     High  
cufflinks 90.215     High High

0 Strain