Gene : PhHAL.9G012200 P. hallii HAL v2.1

Defline:  (1 of 3) 6.2.1.20 - Long-chain-fatty-acid--[acyl-carrier-protein] ligase / Acyl-[acyl-carrier-protein] synthetase Genomic Order:  121
Name:  ? PhHAL.9G012200 Secondary Identifier:  ? PAC:40400862

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY-6622 Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.9G012200 0.5kb upstream 0.5kb upstream 9109 true Chr09: 679537-688645 Panicum hallii HAL
PhHAL.9G012200 0.5kb upstream 0.5kb upstream 500 false Chr09: 679537-680036 Panicum hallii HAL
PhHAL.9G012200 0.5kb downstream 0.5kb downstream 9109 true Chr09: 680037-689145 Panicum hallii HAL
PhHAL.9G012200 0.5kb downstream 0.5kb downstream 500 false Chr09: 688646-689145 Panicum hallii HAL
PhHAL.9G012200 1.0kb upstream 1.0kb upstream 9609 true Chr09: 679037-688645 Panicum hallii HAL
PhHAL.9G012200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 679037-680036 Panicum hallii HAL
PhHAL.9G012200 1.0kb downstream 1.0kb downstream 9609 true Chr09: 680037-689645 Panicum hallii HAL
PhHAL.9G012200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 688646-689645 Panicum hallii HAL
PhHAL.9G012200 2.0kb upstream 2.0kb upstream 10609 true Chr09: 678037-688645 Panicum hallii HAL
PhHAL.9G012200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 678037-680036 Panicum hallii HAL
PhHAL.9G012200 2.0kb downstream 2.0kb downstream 10609 true Chr09: 680037-690645 Panicum hallii HAL
PhHAL.9G012200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 688646-690645 Panicum hallii HAL
PhHAL.9G012200 5.0kb upstream 5.0kb upstream 13609 true Chr09: 675037-688645 Panicum hallii HAL
PhHAL.9G012200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 675037-680036 Panicum hallii HAL
PhHAL.9G012200 5.0kb downstream 5.0kb downstream 13609 true Chr09: 680037-693645 Panicum hallii HAL
PhHAL.9G012200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 688646-693645 Panicum hallii HAL
PhHAL.9G012200 10.0kb upstream 10.0kb upstream 18609 true Chr09: 670037-688645 Panicum hallii HAL
PhHAL.9G012200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 670037-680036 Panicum hallii HAL
PhHAL.9G012200 10.0kb downstream 10.0kb downstream 18609 true Chr09: 680037-698645 Panicum hallii HAL
PhHAL.9G012200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 688646-698645 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182731 5267 Panicoideae View MSA
124571793 5269 Grass View MSA
122041588 5273 Angiosperm View MSA
121344484 5274 Embryophyte View MSA
123427454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier