Gene : Glyma.07G188400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23315:SF112 - U-BOX DOMAIN-CONTAINING PROTEIN 8 Genomic Order:  1884
Name:  ? Glyma.07G188400 Secondary Identifier:  ? PAC:30491937
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G188400 0.5kb upstream 0.5kb upstream 2280 true Chr07: 35599716-35601995 Glycine max
Glyma.07G188400 0.5kb upstream 0.5kb upstream 500 false Chr07: 35601496-35601995 Glycine max
Glyma.07G188400 0.5kb downstream 0.5kb downstream 2280 true Chr07: 35599216-35601495 Glycine max
Glyma.07G188400 0.5kb downstream 0.5kb downstream 500 false Chr07: 35599216-35599715 Glycine max
Glyma.07G188400 1.0kb upstream 1.0kb upstream 2780 true Chr07: 35599716-35602495 Glycine max
Glyma.07G188400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 35601496-35602495 Glycine max
Glyma.07G188400 1.0kb downstream 1.0kb downstream 2780 true Chr07: 35598716-35601495 Glycine max
Glyma.07G188400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 35598716-35599715 Glycine max
Glyma.07G188400 2.0kb upstream 2.0kb upstream 3780 true Chr07: 35599716-35603495 Glycine max
Glyma.07G188400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 35601496-35603495 Glycine max
Glyma.07G188400 2.0kb downstream 2.0kb downstream 3780 true Chr07: 35597716-35601495 Glycine max
Glyma.07G188400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 35597716-35599715 Glycine max
Glyma.07G188400 5.0kb upstream 5.0kb upstream 6780 true Chr07: 35599716-35606495 Glycine max
Glyma.07G188400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 35601496-35606495 Glycine max
Glyma.07G188400 5.0kb downstream 5.0kb downstream 6780 true Chr07: 35594716-35601495 Glycine max
Glyma.07G188400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 35594716-35599715 Glycine max
Glyma.07G188400 10.0kb upstream 10.0kb upstream 11780 true Chr07: 35599716-35611495 Glycine max
Glyma.07G188400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 35601496-35611495 Glycine max
Glyma.07G188400 10.0kb downstream 10.0kb downstream 11780 true Chr07: 35589716-35601495 Glycine max
Glyma.07G188400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 35589716-35599715 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305507 5265 Fabidae View MSA
124067004 5270 Rosid View MSA
123739822 5271 Pentapetalae View MSA
122791659 5272 Eudicot View MSA
122041968 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.55911 0.0 8.2506    
cufflinks 1.36404 0.0 4.75379    
cufflinks 2.16892 0.0 7.23131    
cufflinks 1.65793 0.0 5.6665    
cufflinks 1.96536 0.0 6.51712    
cufflinks 4.24009 0.0 12.6951   High
cufflinks 1.21813 0.0 4.26195   Low
cufflinks 1.38312 0.0 4.81557    
cufflinks 1.63126 0.0 5.5639    
cufflinks 2.57       High
cufflinks 1.604        
cufflinks 1.718        
cufflinks 1.657        
cufflinks 0.643       Low
cufflinks 0.814        
cufflinks 0.871        
cufflinks 8.822     High High
cufflinks 1.027        
cufflinks 1.111        
cufflinks 0.827        
cufflinks 0.736        
cufflinks 1.01        
cufflinks 1.48        
cufflinks 1.092        
cufflinks 0.963        
cufflinks 2.775       High

0 Strain