Gene : PhHAL.9G472100 P. hallii HAL v2.1

Defline:  (1 of 1) PTHR13247//PTHR13247:SF2 - TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 // SUBFAMILY NOT NAMED Genomic Order:  3970
Name:  ? PhHAL.9G472100 Secondary Identifier:  ? PAC:40397802

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.9G472100 0.5kb upstream 0.5kb upstream 2979 true Chr09: 59450980-59453958 Panicum hallii HAL
PhHAL.9G472100 0.5kb upstream 0.5kb upstream 500 false Chr09: 59450980-59451479 Panicum hallii HAL
PhHAL.9G472100 0.5kb downstream 0.5kb downstream 2979 true Chr09: 59451480-59454458 Panicum hallii HAL
PhHAL.9G472100 0.5kb downstream 0.5kb downstream 500 false Chr09: 59453959-59454458 Panicum hallii HAL
PhHAL.9G472100 1.0kb upstream 1.0kb upstream 3479 true Chr09: 59450480-59453958 Panicum hallii HAL
PhHAL.9G472100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 59450480-59451479 Panicum hallii HAL
PhHAL.9G472100 1.0kb downstream 1.0kb downstream 3479 true Chr09: 59451480-59454958 Panicum hallii HAL
PhHAL.9G472100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 59453959-59454958 Panicum hallii HAL
PhHAL.9G472100 2.0kb upstream 2.0kb upstream 4479 true Chr09: 59449480-59453958 Panicum hallii HAL
PhHAL.9G472100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 59449480-59451479 Panicum hallii HAL
PhHAL.9G472100 2.0kb downstream 2.0kb downstream 4479 true Chr09: 59451480-59455958 Panicum hallii HAL
PhHAL.9G472100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 59453959-59455958 Panicum hallii HAL
PhHAL.9G472100 5.0kb upstream 5.0kb upstream 7479 true Chr09: 59446480-59453958 Panicum hallii HAL
PhHAL.9G472100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 59446480-59451479 Panicum hallii HAL
PhHAL.9G472100 5.0kb downstream 5.0kb downstream 7479 true Chr09: 59451480-59458958 Panicum hallii HAL
PhHAL.9G472100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 59453959-59458958 Panicum hallii HAL
PhHAL.9G472100 10.0kb upstream 10.0kb upstream 12479 true Chr09: 59441480-59453958 Panicum hallii HAL
PhHAL.9G472100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 59441480-59451479 Panicum hallii HAL
PhHAL.9G472100 10.0kb downstream 10.0kb downstream 12479 true Chr09: 59451480-59463958 Panicum hallii HAL
PhHAL.9G472100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 59453959-59463958 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177333 5267 Panicoideae View MSA
124577122 5269 Grass View MSA
122046203 5273 Angiosperm View MSA
123429111 5275 Viridiplantae View MSA
121347777 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier