Gene : Glyma.07G193700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12428//PTHR12428:SF23 - OXA1 Genomic Order:  1937
Name:  ? Glyma.07G193700 Secondary Identifier:  ? PAC:30494153
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G193700 0.5kb upstream 0.5kb upstream 7495 true Chr07: 36227234-36234728 Glycine max
Glyma.07G193700 0.5kb upstream 0.5kb upstream 500 false Chr07: 36234229-36234728 Glycine max
Glyma.07G193700 0.5kb downstream 0.5kb downstream 7495 true Chr07: 36226734-36234228 Glycine max
Glyma.07G193700 0.5kb downstream 0.5kb downstream 500 false Chr07: 36226734-36227233 Glycine max
Glyma.07G193700 1.0kb upstream 1.0kb upstream 7995 true Chr07: 36227234-36235228 Glycine max
Glyma.07G193700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36234229-36235228 Glycine max
Glyma.07G193700 1.0kb downstream 1.0kb downstream 7995 true Chr07: 36226234-36234228 Glycine max
Glyma.07G193700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36226234-36227233 Glycine max
Glyma.07G193700 2.0kb upstream 2.0kb upstream 8995 true Chr07: 36227234-36236228 Glycine max
Glyma.07G193700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36234229-36236228 Glycine max
Glyma.07G193700 2.0kb downstream 2.0kb downstream 8995 true Chr07: 36225234-36234228 Glycine max
Glyma.07G193700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36225234-36227233 Glycine max
Glyma.07G193700 5.0kb upstream 5.0kb upstream 11995 true Chr07: 36227234-36239228 Glycine max
Glyma.07G193700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36234229-36239228 Glycine max
Glyma.07G193700 5.0kb downstream 5.0kb downstream 11995 true Chr07: 36222234-36234228 Glycine max
Glyma.07G193700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36222234-36227233 Glycine max
Glyma.07G193700 10.0kb upstream 10.0kb upstream 16995 true Chr07: 36227234-36244228 Glycine max
Glyma.07G193700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36234229-36244228 Glycine max
Glyma.07G193700 10.0kb downstream 10.0kb downstream 16995 true Chr07: 36217234-36234228 Glycine max
Glyma.07G193700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36217234-36227233 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311244 5265 Fabidae View MSA
124065140 5270 Rosid View MSA
123750990 5271 Pentapetalae View MSA
122794726 5272 Eudicot View MSA
122051610 5273 Angiosperm View MSA
121347323 5274 Embryophyte View MSA
123428331 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3653 0.0 38.4484   High
cufflinks 5.41262 0.0 23.0425   Low
cufflinks 6.88723 0.0 23.063    
cufflinks 6.29708 0.0 25.3092    
cufflinks 10.554 0.0 38.211   High
cufflinks 8.24405 0.0 31.0621    
cufflinks 5.1081 0.0 18.6791   Low
cufflinks 8.20038 0.0 31.4804    
cufflinks 8.00548 0.0 30.7167    
cufflinks 1.282        
cufflinks 1.276        
cufflinks 0.991        
cufflinks 1.499        
cufflinks 1.871       High
cufflinks 1.109        
cufflinks 0.602       Low
cufflinks 1.868       High
cufflinks 1.041        
cufflinks 0.897        
cufflinks 0.631       Low
cufflinks 1.223        
cufflinks 0.596       Low
cufflinks 1.086        
cufflinks 1.177        
cufflinks 0.605       Low
cufflinks 1.291        

0 Strain