Gene : Glyma.07G179800 G. max Wm82.a2.v1
Defline:  (1 of 1) 1.14.11.23//1.14.11.9 - Flavonol synthase / FLS // Flavanone 3-dioxygenase / Naringenin,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) Genomic Order:  1798
Name:  ? Glyma.07G179800 Secondary Identifier:  ? PAC:30494010
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY1F-823 Glycine max pathologic  
Gmax PWY1F-FLAVSYN Glycine max pathologic  
Gmax PWY-3101 Glycine max pathologic  
Gmax PWY-5059 Glycine max pathologic  
Gmax PWY-5152 Glycine max pathologic  
Gmax PWY-5390 Glycine max pathologic  
Gmax PWY-5391 Glycine max pathologic  
Gmax PWY-6787 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G179800 0.5kb upstream 0.5kb upstream 4222 true Chr07: 34505933-34510154 Glycine max
Glyma.07G179800 0.5kb upstream 0.5kb upstream 500 false Chr07: 34509655-34510154 Glycine max
Glyma.07G179800 0.5kb downstream 0.5kb downstream 4222 true Chr07: 34505433-34509654 Glycine max
Glyma.07G179800 0.5kb downstream 0.5kb downstream 500 false Chr07: 34505433-34505932 Glycine max
Glyma.07G179800 1.0kb upstream 1.0kb upstream 4722 true Chr07: 34505933-34510654 Glycine max
Glyma.07G179800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 34509655-34510654 Glycine max
Glyma.07G179800 1.0kb downstream 1.0kb downstream 4722 true Chr07: 34504933-34509654 Glycine max
Glyma.07G179800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 34504933-34505932 Glycine max
Glyma.07G179800 2.0kb upstream 2.0kb upstream 5722 true Chr07: 34505933-34511654 Glycine max
Glyma.07G179800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 34509655-34511654 Glycine max
Glyma.07G179800 2.0kb downstream 2.0kb downstream 5722 true Chr07: 34503933-34509654 Glycine max
Glyma.07G179800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 34503933-34505932 Glycine max
Glyma.07G179800 5.0kb upstream 5.0kb upstream 8722 true Chr07: 34505933-34514654 Glycine max
Glyma.07G179800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 34509655-34514654 Glycine max
Glyma.07G179800 5.0kb downstream 5.0kb downstream 8722 true Chr07: 34500933-34509654 Glycine max
Glyma.07G179800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 34500933-34505932 Glycine max
Glyma.07G179800 10.0kb upstream 10.0kb upstream 13722 true Chr07: 34505933-34519654 Glycine max
Glyma.07G179800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 34509655-34519654 Glycine max
Glyma.07G179800 10.0kb downstream 10.0kb downstream 13722 true Chr07: 34495933-34509654 Glycine max
Glyma.07G179800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 34495933-34505932 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310843 5265 Fabidae View MSA
124074691 5270 Rosid View MSA
123748352 5271 Pentapetalae View MSA
122795529 5272 Eudicot View MSA
122043362 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121349353 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0235069 0.0 0.106604 Low  
cufflinks 0.0292667 0.0 0.129544 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0206606 0.0 0.0949182 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0240837 0.0 0.108931 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.046     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.143       High
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain