Gene : Glyma.07G181000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR36066:SF2 - TRANSCRIPTION FACTOR SAC51-RELATED Genomic Order:  1810
Name:  ? Glyma.07G181000 Secondary Identifier:  ? PAC:30492555
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G181000 0.5kb upstream 0.5kb upstream 4314 true Chr07: 34928349-34932662 Glycine max
Glyma.07G181000 0.5kb upstream 0.5kb upstream 500 false Chr07: 34932163-34932662 Glycine max
Glyma.07G181000 0.5kb downstream 0.5kb downstream 4314 true Chr07: 34927849-34932162 Glycine max
Glyma.07G181000 0.5kb downstream 0.5kb downstream 500 false Chr07: 34927849-34928348 Glycine max
Glyma.07G181000 1.0kb upstream 1.0kb upstream 4814 true Chr07: 34928349-34933162 Glycine max
Glyma.07G181000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 34932163-34933162 Glycine max
Glyma.07G181000 1.0kb downstream 1.0kb downstream 4814 true Chr07: 34927349-34932162 Glycine max
Glyma.07G181000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 34927349-34928348 Glycine max
Glyma.07G181000 2.0kb upstream 2.0kb upstream 5814 true Chr07: 34928349-34934162 Glycine max
Glyma.07G181000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 34932163-34934162 Glycine max
Glyma.07G181000 2.0kb downstream 2.0kb downstream 5814 true Chr07: 34926349-34932162 Glycine max
Glyma.07G181000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 34926349-34928348 Glycine max
Glyma.07G181000 5.0kb upstream 5.0kb upstream 8814 true Chr07: 34928349-34937162 Glycine max
Glyma.07G181000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 34932163-34937162 Glycine max
Glyma.07G181000 5.0kb downstream 5.0kb downstream 8814 true Chr07: 34923349-34932162 Glycine max
Glyma.07G181000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 34923349-34928348 Glycine max
Glyma.07G181000 10.0kb upstream 10.0kb upstream 13814 true Chr07: 34928349-34942162 Glycine max
Glyma.07G181000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 34932163-34942162 Glycine max
Glyma.07G181000 10.0kb downstream 10.0kb downstream 13814 true Chr07: 34918349-34932162 Glycine max
Glyma.07G181000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 34918349-34928348 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255335 5265 Fabidae View MSA
123997102 5270 Rosid View MSA
123750952 5271 Pentapetalae View MSA
122794096 5272 Eudicot View MSA
122042740 5273 Angiosperm View MSA
121310013 5274 Embryophyte View MSA
123347619 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4348 0.0 52.5853    
cufflinks 18.8439 0.0 57.3538    
cufflinks 10.6345 0.0 31.7376    
cufflinks 12.2675 0.0 36.4366    
cufflinks 10.094 0.0 30.322   Low
cufflinks 12.1531 0.0 36.1469    
cufflinks 15.4001 0.0 46.0759    
cufflinks 37.1396 0.0 127.132 High High
cufflinks 20.7031 0.0 63.6532 High  
cufflinks 19.382     High High
cufflinks 12.172     High  
cufflinks 9.742     High  
cufflinks 7.479     High  
cufflinks 2.649       Low
cufflinks 8.024     High  
cufflinks 8.477     High  
cufflinks 7.549     High  
cufflinks 10.367     High  
cufflinks 14.242     High  
cufflinks 11.07     High  
cufflinks 10.988     High  
cufflinks 11.314     High  
cufflinks 6.182        
cufflinks 17.266     High High
cufflinks 9.365     High  
cufflinks 8.471     High  

0 Strain