Gene : Glyma.07G181600 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11945:SF179 - MADS-BOX PROTEIN SVP Genomic Order:  1816
Name:  ? Glyma.07G181600 Secondary Identifier:  ? PAC:30494874
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G181600 0.5kb upstream 0.5kb upstream 12414 true Chr07: 34974514-34986927 Glycine max
Glyma.07G181600 0.5kb upstream 0.5kb upstream 500 false Chr07: 34974514-34975013 Glycine max
Glyma.07G181600 0.5kb downstream 0.5kb downstream 12414 true Chr07: 34975014-34987427 Glycine max
Glyma.07G181600 0.5kb downstream 0.5kb downstream 500 false Chr07: 34986928-34987427 Glycine max
Glyma.07G181600 1.0kb upstream 1.0kb upstream 12914 true Chr07: 34974014-34986927 Glycine max
Glyma.07G181600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 34974014-34975013 Glycine max
Glyma.07G181600 1.0kb downstream 1.0kb downstream 12914 true Chr07: 34975014-34987927 Glycine max
Glyma.07G181600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 34986928-34987927 Glycine max
Glyma.07G181600 2.0kb upstream 2.0kb upstream 13914 true Chr07: 34973014-34986927 Glycine max
Glyma.07G181600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 34973014-34975013 Glycine max
Glyma.07G181600 2.0kb downstream 2.0kb downstream 13914 true Chr07: 34975014-34988927 Glycine max
Glyma.07G181600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 34986928-34988927 Glycine max
Glyma.07G181600 5.0kb upstream 5.0kb upstream 16914 true Chr07: 34970014-34986927 Glycine max
Glyma.07G181600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 34970014-34975013 Glycine max
Glyma.07G181600 5.0kb downstream 5.0kb downstream 16914 true Chr07: 34975014-34991927 Glycine max
Glyma.07G181600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 34986928-34991927 Glycine max
Glyma.07G181600 10.0kb upstream 10.0kb upstream 21914 true Chr07: 34965014-34986927 Glycine max
Glyma.07G181600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 34965014-34975013 Glycine max
Glyma.07G181600 10.0kb downstream 10.0kb downstream 21914 true Chr07: 34975014-34996927 Glycine max
Glyma.07G181600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 34986928-34996927 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296327 5265 Fabidae View MSA
124040371 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.19602 0.0 15.7692    
cufflinks 3.27831 0.0 22.5958   High
cufflinks 1.14289 0.0 9.89547    
cufflinks 0.0717518 0.0 0.302701 Low Low
cufflinks 0.462197 0.0 4.67868    
cufflinks 2.5025 0.0 16.9876    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.030317 0.0 0.154486 Low Low
cufflinks 0.533665 0.0 3.40475    
cufflinks 0.017     Low  
cufflinks 0.595        
cufflinks 0.009     Low Low
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.51        
cufflinks 0.09        
cufflinks 0.006     Low Low
cufflinks 0.344        
cufflinks 0.698        
cufflinks 0.454        
cufflinks 0.604        
cufflinks 0.203        
cufflinks 0.37        
cufflinks 0.583        
cufflinks 0.334        

0 Strain