Gene : Glyma.07G184800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR16254:SF6 - K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC Genomic Order:  1848
Name:  ? Glyma.07G184800 Secondary Identifier:  ? PAC:30494138
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G184800 0.5kb upstream 0.5kb upstream 11788 true Chr07: 35228640-35240427 Glycine max
Glyma.07G184800 0.5kb upstream 0.5kb upstream 500 false Chr07: 35228640-35229139 Glycine max
Glyma.07G184800 0.5kb downstream 0.5kb downstream 11788 true Chr07: 35229140-35240927 Glycine max
Glyma.07G184800 0.5kb downstream 0.5kb downstream 500 false Chr07: 35240428-35240927 Glycine max
Glyma.07G184800 1.0kb upstream 1.0kb upstream 12288 true Chr07: 35228140-35240427 Glycine max
Glyma.07G184800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 35228140-35229139 Glycine max
Glyma.07G184800 1.0kb downstream 1.0kb downstream 12288 true Chr07: 35229140-35241427 Glycine max
Glyma.07G184800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 35240428-35241427 Glycine max
Glyma.07G184800 2.0kb upstream 2.0kb upstream 13288 true Chr07: 35227140-35240427 Glycine max
Glyma.07G184800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 35227140-35229139 Glycine max
Glyma.07G184800 2.0kb downstream 2.0kb downstream 13288 true Chr07: 35229140-35242427 Glycine max
Glyma.07G184800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 35240428-35242427 Glycine max
Glyma.07G184800 5.0kb upstream 5.0kb upstream 16288 true Chr07: 35224140-35240427 Glycine max
Glyma.07G184800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 35224140-35229139 Glycine max
Glyma.07G184800 5.0kb downstream 5.0kb downstream 16288 true Chr07: 35229140-35245427 Glycine max
Glyma.07G184800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 35240428-35245427 Glycine max
Glyma.07G184800 10.0kb upstream 10.0kb upstream 21288 true Chr07: 35219140-35240427 Glycine max
Glyma.07G184800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 35219140-35229139 Glycine max
Glyma.07G184800 10.0kb downstream 10.0kb downstream 21288 true Chr07: 35229140-35250427 Glycine max
Glyma.07G184800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 35240428-35250427 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307185 5265 Fabidae View MSA
124073703 5270 Rosid View MSA
123753346 5271 Pentapetalae View MSA
122792780 5272 Eudicot View MSA
122044963 5273 Angiosperm View MSA
121347903 5274 Embryophyte View MSA
123428827 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.2917 0.0 153.035 High High
cufflinks 12.9219 0.0 49.6884    
cufflinks 19.8711 0.0 72.7419   High
cufflinks 10.0454 0.0 38.3385    
cufflinks 2.44499 0.0 10.7288    
cufflinks 1.88314 0.0 7.61476   Low
cufflinks 2.72378 0.0 9.92773    
cufflinks 6.04478 0.0 21.4651    
cufflinks 3.32646 0.0 13.2308    
cufflinks 1.03        
cufflinks 0.279        
cufflinks 1.52        
cufflinks 0.145       Low
cufflinks 0.156       Low
cufflinks 0.629        
cufflinks 2.45        
cufflinks 0.135       Low
cufflinks 1.327        
cufflinks 1.513        
cufflinks 2.705       High
cufflinks 0.172       Low
cufflinks 3.081       High
cufflinks 2.719       High
cufflinks 0.421        
cufflinks 3.39       High
cufflinks 0.122       Low

0 Strain