Gene : Glyma.07G185400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11540:SF21 - MALATE DEHYDROGENASE, GLYOXYSOMAL Genomic Order:  1854
Name:  ? Glyma.07G185400 Secondary Identifier:  ? PAC:30495122
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax GLYOXYLATE-BYPASS Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  
Gmax PWY-7115 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G185400 0.5kb upstream 0.5kb upstream 4492 true Chr07: 35301647-35306138 Glycine max
Glyma.07G185400 0.5kb upstream 0.5kb upstream 500 false Chr07: 35305639-35306138 Glycine max
Glyma.07G185400 0.5kb downstream 0.5kb downstream 4492 true Chr07: 35301147-35305638 Glycine max
Glyma.07G185400 0.5kb downstream 0.5kb downstream 500 false Chr07: 35301147-35301646 Glycine max
Glyma.07G185400 1.0kb upstream 1.0kb upstream 4992 true Chr07: 35301647-35306638 Glycine max
Glyma.07G185400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 35305639-35306638 Glycine max
Glyma.07G185400 1.0kb downstream 1.0kb downstream 4992 true Chr07: 35300647-35305638 Glycine max
Glyma.07G185400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 35300647-35301646 Glycine max
Glyma.07G185400 2.0kb upstream 2.0kb upstream 5992 true Chr07: 35301647-35307638 Glycine max
Glyma.07G185400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 35305639-35307638 Glycine max
Glyma.07G185400 2.0kb downstream 2.0kb downstream 5992 true Chr07: 35299647-35305638 Glycine max
Glyma.07G185400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 35299647-35301646 Glycine max
Glyma.07G185400 5.0kb upstream 5.0kb upstream 8992 true Chr07: 35301647-35310638 Glycine max
Glyma.07G185400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 35305639-35310638 Glycine max
Glyma.07G185400 5.0kb downstream 5.0kb downstream 8992 true Chr07: 35296647-35305638 Glycine max
Glyma.07G185400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 35296647-35301646 Glycine max
Glyma.07G185400 10.0kb upstream 10.0kb upstream 13992 true Chr07: 35301647-35315638 Glycine max
Glyma.07G185400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 35305639-35315638 Glycine max
Glyma.07G185400 10.0kb downstream 10.0kb downstream 13992 true Chr07: 35291647-35305638 Glycine max
Glyma.07G185400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 35291647-35301646 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313107 5265 Fabidae View MSA
124072228 5270 Rosid View MSA
123748567 5271 Pentapetalae View MSA
122789839 5272 Eudicot View MSA
122041534 5273 Angiosperm View MSA
121344614 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 107.74 0.0 464.665 High High
cufflinks 19.5834 0.0 67.2436    
cufflinks 7.10406 0.0 27.1744    
cufflinks 9.02022 0.0 33.6472    
cufflinks 5.38898 0.0 19.0115    
cufflinks 4.87175 0.0 17.6433    
cufflinks 8.03924 0.0 29.8138    
cufflinks 8.54539 0.0 31.8073    
cufflinks 5.17512 0.0 21.5567    
cufflinks 1.498        
cufflinks 0.244       Low
cufflinks 1.634        
cufflinks 0.753        
cufflinks 0.793        
cufflinks 0.195       Low
cufflinks 10.628     High High
cufflinks 0.851        
cufflinks 2.301        
cufflinks 2.716        
cufflinks 13.014     High High
cufflinks 0.457        
cufflinks 10.205     High High
cufflinks 8.904     High High
cufflinks 0.346       Low
cufflinks 12.629     High High
cufflinks 0.85        

0 Strain