Gene : Glyma.07G185900 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR32285:SF12 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 13 Genomic Order:  1859
Name:  ? Glyma.07G185900 Secondary Identifier:  ? PAC:30491989
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G185900 0.5kb upstream 0.5kb upstream 4780 true Chr07: 35349794-35354573 Glycine max
Glyma.07G185900 0.5kb upstream 0.5kb upstream 500 false Chr07: 35349794-35350293 Glycine max
Glyma.07G185900 0.5kb downstream 0.5kb downstream 4780 true Chr07: 35350294-35355073 Glycine max
Glyma.07G185900 0.5kb downstream 0.5kb downstream 500 false Chr07: 35354574-35355073 Glycine max
Glyma.07G185900 1.0kb upstream 1.0kb upstream 5280 true Chr07: 35349294-35354573 Glycine max
Glyma.07G185900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 35349294-35350293 Glycine max
Glyma.07G185900 1.0kb downstream 1.0kb downstream 5280 true Chr07: 35350294-35355573 Glycine max
Glyma.07G185900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 35354574-35355573 Glycine max
Glyma.07G185900 2.0kb upstream 2.0kb upstream 6280 true Chr07: 35348294-35354573 Glycine max
Glyma.07G185900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 35348294-35350293 Glycine max
Glyma.07G185900 2.0kb downstream 2.0kb downstream 6280 true Chr07: 35350294-35356573 Glycine max
Glyma.07G185900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 35354574-35356573 Glycine max
Glyma.07G185900 5.0kb upstream 5.0kb upstream 9280 true Chr07: 35345294-35354573 Glycine max
Glyma.07G185900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 35345294-35350293 Glycine max
Glyma.07G185900 5.0kb downstream 5.0kb downstream 9280 true Chr07: 35350294-35359573 Glycine max
Glyma.07G185900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 35354574-35359573 Glycine max
Glyma.07G185900 10.0kb upstream 10.0kb upstream 14280 true Chr07: 35340294-35354573 Glycine max
Glyma.07G185900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 35340294-35350293 Glycine max
Glyma.07G185900 10.0kb downstream 10.0kb downstream 14280 true Chr07: 35350294-35364573 Glycine max
Glyma.07G185900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 35354574-35364573 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299304 5265 Fabidae View MSA
124066709 5270 Rosid View MSA
123753462 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.80197 0.0 8.98742   Low
cufflinks 7.41955 0.0 20.9603    
cufflinks 3.61113 0.0 11.2064   Low
cufflinks 10.466 0.0 28.6205   High
cufflinks 8.16943 0.0 22.7569    
cufflinks 4.55231 0.0 13.6189    
cufflinks 7.19834 0.0 20.3385    
cufflinks 8.49842 0.0 23.6435    
cufflinks 4.43651 0.0 13.3421    
cufflinks 3.429        
cufflinks 0.439       Low
cufflinks 1.898        
cufflinks 3.432        
cufflinks 4.513       High
cufflinks 0.361       Low
cufflinks 2.621        
cufflinks 0.636       Low
cufflinks 3.077        
cufflinks 3.749        
cufflinks 2.183        
cufflinks 0.977        
cufflinks 2.255        
cufflinks 3.017        
cufflinks 0.549       Low
cufflinks 2.223        
cufflinks 1.067        

0 Strain