Gene : Glyma.07G233200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23068//PTHR23068:SF11 - DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED Genomic Order:  2332
Name:  ? Glyma.07G233200 Secondary Identifier:  ? PAC:30493632
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G233200 0.5kb upstream 0.5kb upstream 13067 true Chr07: 41446780-41459846 Glycine max
Glyma.07G233200 0.5kb upstream 0.5kb upstream 500 false Chr07: 41459347-41459846 Glycine max
Glyma.07G233200 0.5kb downstream 0.5kb downstream 13067 true Chr07: 41446280-41459346 Glycine max
Glyma.07G233200 0.5kb downstream 0.5kb downstream 500 false Chr07: 41446280-41446779 Glycine max
Glyma.07G233200 1.0kb upstream 1.0kb upstream 13567 true Chr07: 41446780-41460346 Glycine max
Glyma.07G233200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 41459347-41460346 Glycine max
Glyma.07G233200 1.0kb downstream 1.0kb downstream 13567 true Chr07: 41445780-41459346 Glycine max
Glyma.07G233200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 41445780-41446779 Glycine max
Glyma.07G233200 2.0kb upstream 2.0kb upstream 14567 true Chr07: 41446780-41461346 Glycine max
Glyma.07G233200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 41459347-41461346 Glycine max
Glyma.07G233200 2.0kb downstream 2.0kb downstream 14567 true Chr07: 41444780-41459346 Glycine max
Glyma.07G233200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 41444780-41446779 Glycine max
Glyma.07G233200 5.0kb upstream 5.0kb upstream 17567 true Chr07: 41446780-41464346 Glycine max
Glyma.07G233200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 41459347-41464346 Glycine max
Glyma.07G233200 5.0kb downstream 5.0kb downstream 17567 true Chr07: 41441780-41459346 Glycine max
Glyma.07G233200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 41441780-41446779 Glycine max
Glyma.07G233200 10.0kb upstream 10.0kb upstream 22567 true Chr07: 41446780-41469346 Glycine max
Glyma.07G233200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 41459347-41469346 Glycine max
Glyma.07G233200 10.0kb downstream 10.0kb downstream 22567 true Chr07: 41436780-41459346 Glycine max
Glyma.07G233200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 41436780-41446779 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304849 5265 Fabidae View MSA
124066884 5270 Rosid View MSA
123739152 5271 Pentapetalae View MSA
122785997 5272 Eudicot View MSA
122049231 5273 Angiosperm View MSA
121350699 5274 Embryophyte View MSA
123381851 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.35909 0.0 6.96909   Low
cufflinks 3.83029 0.0 15.9193    
cufflinks 1.58567 0.0 5.5301   Low
cufflinks 5.44659 0.0 20.8864    
cufflinks 2.00473 0.0 6.59082    
cufflinks 4.0945 0.0 14.0679    
cufflinks 14.244 0.0 50.5196   High
cufflinks 3.15976 0.0 11.5551    
cufflinks 3.12994 0.0 11.532    
cufflinks 0.399        
cufflinks 0.078       Low
cufflinks 0.429        
cufflinks 0.311        
cufflinks 0.343        
cufflinks 0.157        
cufflinks 0.243        
cufflinks 0.198        
cufflinks 0.837       High
cufflinks 0.59       High
cufflinks 0.258        
cufflinks 0.104       Low
cufflinks 0.282        
cufflinks 0.308        
cufflinks 0.091       Low
cufflinks 0.268        
cufflinks 0.168        

0 Strain