Gene : Glyma.07G235200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12428//PTHR12428:SF23 - OXA1 Genomic Order:  2352
Name:  ? Glyma.07G235200 Secondary Identifier:  ? PAC:30491783
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G235200 0.5kb upstream 0.5kb upstream 23255 true Chr07: 41608898-41632152 Glycine max
Glyma.07G235200 0.5kb upstream 0.5kb upstream 500 false Chr07: 41608898-41609397 Glycine max
Glyma.07G235200 0.5kb downstream 0.5kb downstream 23255 true Chr07: 41609398-41632652 Glycine max
Glyma.07G235200 0.5kb downstream 0.5kb downstream 500 false Chr07: 41632153-41632652 Glycine max
Glyma.07G235200 1.0kb upstream 1.0kb upstream 23755 true Chr07: 41608398-41632152 Glycine max
Glyma.07G235200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 41608398-41609397 Glycine max
Glyma.07G235200 1.0kb downstream 1.0kb downstream 23755 true Chr07: 41609398-41633152 Glycine max
Glyma.07G235200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 41632153-41633152 Glycine max
Glyma.07G235200 2.0kb upstream 2.0kb upstream 24755 true Chr07: 41607398-41632152 Glycine max
Glyma.07G235200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 41607398-41609397 Glycine max
Glyma.07G235200 2.0kb downstream 2.0kb downstream 24755 true Chr07: 41609398-41634152 Glycine max
Glyma.07G235200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 41632153-41634152 Glycine max
Glyma.07G235200 5.0kb upstream 5.0kb upstream 27755 true Chr07: 41604398-41632152 Glycine max
Glyma.07G235200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 41604398-41609397 Glycine max
Glyma.07G235200 5.0kb downstream 5.0kb downstream 27755 true Chr07: 41609398-41637152 Glycine max
Glyma.07G235200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 41632153-41637152 Glycine max
Glyma.07G235200 10.0kb upstream 10.0kb upstream 32755 true Chr07: 41599398-41632152 Glycine max
Glyma.07G235200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 41599398-41609397 Glycine max
Glyma.07G235200 10.0kb downstream 10.0kb downstream 32755 true Chr07: 41609398-41642152 Glycine max
Glyma.07G235200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 41632153-41642152 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311244 5265 Fabidae View MSA
124065140 5270 Rosid View MSA
123750990 5271 Pentapetalae View MSA
122794726 5272 Eudicot View MSA
122051610 5273 Angiosperm View MSA
121347323 5274 Embryophyte View MSA
123428331 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.0698 0.0 27.4287   High
cufflinks 4.55154 0.0 13.4107    
cufflinks 2.55536 0.0 8.12663   Low
cufflinks 4.46946 0.0 13.1821    
cufflinks 10.3008 0.0 28.0289   High
cufflinks 4.8725 0.0 14.2546    
cufflinks 6.83175 0.0 19.2498    
cufflinks 5.64512 0.0 16.1677    
cufflinks 6.01187 0.0 17.1134    
cufflinks 0.483        
cufflinks 0.18       Low
cufflinks 0.257        
cufflinks 0.91       High
cufflinks 1.19       High
cufflinks 0.271        
cufflinks 0.315        
cufflinks 0.323        
cufflinks 0.443        
cufflinks 0.398        
cufflinks 0.259        
cufflinks 0.344        
cufflinks 0.363        
cufflinks 0.435        
cufflinks 0.227       Low
cufflinks 0.315        
cufflinks 0.333        

0 Strain