Gene : Glyma.07G235400 G. max Wm82.a2.v1
Defline:  (1 of 5) 4.1.3.4 - Hydroxymethylglutaryl-CoA lyase / HMG-CoA lyase Genomic Order:  2354
Name:  ? Glyma.07G235400 Secondary Identifier:  ? PAC:30493315
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LEU-DEG2-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G235400 0.5kb upstream 0.5kb upstream 6201 true Chr07: 41672096-41678296 Glycine max
Glyma.07G235400 0.5kb upstream 0.5kb upstream 500 false Chr07: 41677797-41678296 Glycine max
Glyma.07G235400 0.5kb downstream 0.5kb downstream 6201 true Chr07: 41671596-41677796 Glycine max
Glyma.07G235400 0.5kb downstream 0.5kb downstream 500 false Chr07: 41671596-41672095 Glycine max
Glyma.07G235400 1.0kb upstream 1.0kb upstream 6701 true Chr07: 41672096-41678796 Glycine max
Glyma.07G235400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 41677797-41678796 Glycine max
Glyma.07G235400 1.0kb downstream 1.0kb downstream 6701 true Chr07: 41671096-41677796 Glycine max
Glyma.07G235400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 41671096-41672095 Glycine max
Glyma.07G235400 2.0kb upstream 2.0kb upstream 7701 true Chr07: 41672096-41679796 Glycine max
Glyma.07G235400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 41677797-41679796 Glycine max
Glyma.07G235400 2.0kb downstream 2.0kb downstream 7701 true Chr07: 41670096-41677796 Glycine max
Glyma.07G235400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 41670096-41672095 Glycine max
Glyma.07G235400 5.0kb upstream 5.0kb upstream 10701 true Chr07: 41672096-41682796 Glycine max
Glyma.07G235400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 41677797-41682796 Glycine max
Glyma.07G235400 5.0kb downstream 5.0kb downstream 10701 true Chr07: 41667096-41677796 Glycine max
Glyma.07G235400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 41667096-41672095 Glycine max
Glyma.07G235400 10.0kb upstream 10.0kb upstream 15701 true Chr07: 41672096-41687796 Glycine max
Glyma.07G235400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 41677797-41687796 Glycine max
Glyma.07G235400 10.0kb downstream 10.0kb downstream 15701 true Chr07: 41662096-41677796 Glycine max
Glyma.07G235400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 41662096-41672095 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314208 5265 Fabidae View MSA
124074648 5270 Rosid View MSA
123743387 5271 Pentapetalae View MSA
122790168 5272 Eudicot View MSA
122045409 5273 Angiosperm View MSA
121347999 5274 Embryophyte View MSA
123426187 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.79 0.0 109.775 High High
cufflinks 3.51017 0.0 10.6658   Low
cufflinks 10.6199 0.0 28.7064    
cufflinks 8.71566 0.0 23.8747    
cufflinks 4.47709 0.0 13.1574    
cufflinks 10.6537 0.0 28.8145    
cufflinks 3.25523 0.0 10.0143   Low
cufflinks 7.67303 0.0 21.2299    
cufflinks 5.50766 0.0 15.754    
cufflinks 1.963        
cufflinks 3.421        
cufflinks 3.211        
cufflinks 1.721        
cufflinks 0.766       Low
cufflinks 1.595        
cufflinks 2.3        
cufflinks 3.899       High
cufflinks 2.136        
cufflinks 1.681        
cufflinks 2.183        
cufflinks 2.684        
cufflinks 2.861        
cufflinks 2.574        
cufflinks 4.578       High
cufflinks 2.425        
cufflinks 3.413        

0 Strain