Gene : Glyma.07G235800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11254:SF281 - E3 UBIQUITIN-PROTEIN LIGASE UPL6 Genomic Order:  2358
Name:  ? Glyma.07G235800 Secondary Identifier:  ? PAC:30493869
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G235800 0.5kb upstream 0.5kb upstream 16212 true Chr07: 41728944-41745155 Glycine max
Glyma.07G235800 0.5kb upstream 0.5kb upstream 500 false Chr07: 41744656-41745155 Glycine max
Glyma.07G235800 0.5kb downstream 0.5kb downstream 16212 true Chr07: 41728444-41744655 Glycine max
Glyma.07G235800 0.5kb downstream 0.5kb downstream 500 false Chr07: 41728444-41728943 Glycine max
Glyma.07G235800 1.0kb upstream 1.0kb upstream 16712 true Chr07: 41728944-41745655 Glycine max
Glyma.07G235800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 41744656-41745655 Glycine max
Glyma.07G235800 1.0kb downstream 1.0kb downstream 16712 true Chr07: 41727944-41744655 Glycine max
Glyma.07G235800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 41727944-41728943 Glycine max
Glyma.07G235800 2.0kb upstream 2.0kb upstream 17712 true Chr07: 41728944-41746655 Glycine max
Glyma.07G235800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 41744656-41746655 Glycine max
Glyma.07G235800 2.0kb downstream 2.0kb downstream 17712 true Chr07: 41726944-41744655 Glycine max
Glyma.07G235800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 41726944-41728943 Glycine max
Glyma.07G235800 5.0kb upstream 5.0kb upstream 20712 true Chr07: 41728944-41749655 Glycine max
Glyma.07G235800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 41744656-41749655 Glycine max
Glyma.07G235800 5.0kb downstream 5.0kb downstream 20712 true Chr07: 41723944-41744655 Glycine max
Glyma.07G235800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 41723944-41728943 Glycine max
Glyma.07G235800 10.0kb upstream 10.0kb upstream 25712 true Chr07: 41728944-41754655 Glycine max
Glyma.07G235800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 41744656-41754655 Glycine max
Glyma.07G235800 10.0kb downstream 10.0kb downstream 25712 true Chr07: 41718944-41744655 Glycine max
Glyma.07G235800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 41718944-41728943 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255169 5265 Fabidae View MSA
124063556 5270 Rosid View MSA
123740343 5271 Pentapetalae View MSA
122788318 5272 Eudicot View MSA
122046917 5273 Angiosperm View MSA
123429069 5275 Viridiplantae View MSA
121344767 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.8048 0.0 38.912    
cufflinks 11.1587 0.0 42.227    
cufflinks 22.0608 0.0 73.6218 High High
cufflinks 12.04 0.0 46.2077    
cufflinks 9.39637 0.0 35.301    
cufflinks 8.657 0.0 25.6881   Low
cufflinks 11.9355 0.0 35.9986    
cufflinks 13.3599 0.0 51.3209    
cufflinks 11.5985 0.0 44.6013    
cufflinks 1.941        
cufflinks 2.641       High
cufflinks 2.34        
cufflinks 1.643        
cufflinks 1.326       Low
cufflinks 1.981        
cufflinks 1.602        
cufflinks 2.035        
cufflinks 2.504        
cufflinks 2.322        
cufflinks 1.719        
cufflinks 2.529        
cufflinks 1.869        
cufflinks 1.569       Low
cufflinks 3.089       High
cufflinks 1.645        
cufflinks 3.066       High

0 Strain