Gene : Glyma.07G228200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31741:SF3 - O-FUCOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  2282
Name:  ? Glyma.07G228200 Secondary Identifier:  ? PAC:30492270
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G228200 0.5kb upstream 0.5kb upstream 8047 true Chr07: 40632681-40640727 Glycine max
Glyma.07G228200 0.5kb upstream 0.5kb upstream 500 false Chr07: 40632681-40633180 Glycine max
Glyma.07G228200 0.5kb downstream 0.5kb downstream 8047 true Chr07: 40633181-40641227 Glycine max
Glyma.07G228200 0.5kb downstream 0.5kb downstream 500 false Chr07: 40640728-40641227 Glycine max
Glyma.07G228200 1.0kb upstream 1.0kb upstream 8547 true Chr07: 40632181-40640727 Glycine max
Glyma.07G228200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 40632181-40633180 Glycine max
Glyma.07G228200 1.0kb downstream 1.0kb downstream 8547 true Chr07: 40633181-40641727 Glycine max
Glyma.07G228200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 40640728-40641727 Glycine max
Glyma.07G228200 2.0kb upstream 2.0kb upstream 9547 true Chr07: 40631181-40640727 Glycine max
Glyma.07G228200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 40631181-40633180 Glycine max
Glyma.07G228200 2.0kb downstream 2.0kb downstream 9547 true Chr07: 40633181-40642727 Glycine max
Glyma.07G228200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 40640728-40642727 Glycine max
Glyma.07G228200 5.0kb upstream 5.0kb upstream 12547 true Chr07: 40628181-40640727 Glycine max
Glyma.07G228200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 40628181-40633180 Glycine max
Glyma.07G228200 5.0kb downstream 5.0kb downstream 12547 true Chr07: 40633181-40645727 Glycine max
Glyma.07G228200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 40640728-40645727 Glycine max
Glyma.07G228200 10.0kb upstream 10.0kb upstream 17547 true Chr07: 40623181-40640727 Glycine max
Glyma.07G228200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 40623181-40633180 Glycine max
Glyma.07G228200 10.0kb downstream 10.0kb downstream 17547 true Chr07: 40633181-40650727 Glycine max
Glyma.07G228200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 40640728-40650727 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310707 5265 Fabidae View MSA
124072479 5270 Rosid View MSA
123747295 5271 Pentapetalae View MSA
122788549 5272 Eudicot View MSA
122046099 5273 Angiosperm View MSA
121348832 5274 Embryophyte View MSA
123381034 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.71501 0.0 30.7627   Low
cufflinks 3.34883 0.0 32.641    
cufflinks 2.81725 0.0 20.2655   Low
cufflinks 5.56424 0.0 33.2852   High
cufflinks 3.1484 0.0 16.4747    
cufflinks 4.2737 0.0 18.3695    
cufflinks 5.30057 0.0 24.9542    
cufflinks 6.78478 0.0 35.0529   High
cufflinks 3.8507 0.0 17.0978    
cufflinks 0.703       High
cufflinks 0.347       Low
cufflinks 0.527        
cufflinks 0.652        
cufflinks 0.741       High
cufflinks 0.328       Low
cufflinks 0.559        
cufflinks 0.381       Low
cufflinks 0.62        
cufflinks 0.769       High
cufflinks 0.531        
cufflinks 0.406       Low
cufflinks 0.601        
cufflinks 0.56        
cufflinks 0.56        
cufflinks 0.528        
cufflinks 0.469        

0 Strain