Gene : Glyma.07G228900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN Genomic Order:  2289
Name:  ? Glyma.07G228900 Secondary Identifier:  ? PAC:30494662
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G228900 0.5kb upstream 0.5kb upstream 7599 true Chr07: 40859542-40867140 Glycine max
Glyma.07G228900 0.5kb upstream 0.5kb upstream 500 false Chr07: 40859542-40860041 Glycine max
Glyma.07G228900 0.5kb downstream 0.5kb downstream 7599 true Chr07: 40860042-40867640 Glycine max
Glyma.07G228900 0.5kb downstream 0.5kb downstream 500 false Chr07: 40867141-40867640 Glycine max
Glyma.07G228900 1.0kb upstream 1.0kb upstream 8099 true Chr07: 40859042-40867140 Glycine max
Glyma.07G228900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 40859042-40860041 Glycine max
Glyma.07G228900 1.0kb downstream 1.0kb downstream 8099 true Chr07: 40860042-40868140 Glycine max
Glyma.07G228900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 40867141-40868140 Glycine max
Glyma.07G228900 2.0kb upstream 2.0kb upstream 9099 true Chr07: 40858042-40867140 Glycine max
Glyma.07G228900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 40858042-40860041 Glycine max
Glyma.07G228900 2.0kb downstream 2.0kb downstream 9099 true Chr07: 40860042-40869140 Glycine max
Glyma.07G228900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 40867141-40869140 Glycine max
Glyma.07G228900 5.0kb upstream 5.0kb upstream 12099 true Chr07: 40855042-40867140 Glycine max
Glyma.07G228900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 40855042-40860041 Glycine max
Glyma.07G228900 5.0kb downstream 5.0kb downstream 12099 true Chr07: 40860042-40872140 Glycine max
Glyma.07G228900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 40867141-40872140 Glycine max
Glyma.07G228900 10.0kb upstream 10.0kb upstream 17099 true Chr07: 40850042-40867140 Glycine max
Glyma.07G228900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 40850042-40860041 Glycine max
Glyma.07G228900 10.0kb downstream 10.0kb downstream 17099 true Chr07: 40860042-40877140 Glycine max
Glyma.07G228900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 40867141-40877140 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312071 5265 Fabidae View MSA
124062317 5270 Rosid View MSA
123742642 5271 Pentapetalae View MSA
122791202 5272 Eudicot View MSA
122050633 5273 Angiosperm View MSA
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.15117 0.0 7.17213    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0151404 0.0 0.068525 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.186        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.953        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain