Gene : Glyma.07G229800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31499:SF11 - HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN Genomic Order:  2298
Name:  ? Glyma.07G229800 Secondary Identifier:  ? PAC:30493086
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G229800 0.5kb upstream 0.5kb upstream 2942 true Chr07: 40998672-41001613 Glycine max
Glyma.07G229800 0.5kb upstream 0.5kb upstream 500 false Chr07: 41001114-41001613 Glycine max
Glyma.07G229800 0.5kb downstream 0.5kb downstream 2942 true Chr07: 40998172-41001113 Glycine max
Glyma.07G229800 0.5kb downstream 0.5kb downstream 500 false Chr07: 40998172-40998671 Glycine max
Glyma.07G229800 1.0kb upstream 1.0kb upstream 3442 true Chr07: 40998672-41002113 Glycine max
Glyma.07G229800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 41001114-41002113 Glycine max
Glyma.07G229800 1.0kb downstream 1.0kb downstream 3442 true Chr07: 40997672-41001113 Glycine max
Glyma.07G229800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 40997672-40998671 Glycine max
Glyma.07G229800 2.0kb upstream 2.0kb upstream 4442 true Chr07: 40998672-41003113 Glycine max
Glyma.07G229800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 41001114-41003113 Glycine max
Glyma.07G229800 2.0kb downstream 2.0kb downstream 4442 true Chr07: 40996672-41001113 Glycine max
Glyma.07G229800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 40996672-40998671 Glycine max
Glyma.07G229800 5.0kb upstream 5.0kb upstream 7442 true Chr07: 40998672-41006113 Glycine max
Glyma.07G229800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 41001114-41006113 Glycine max
Glyma.07G229800 5.0kb downstream 5.0kb downstream 7442 true Chr07: 40993672-41001113 Glycine max
Glyma.07G229800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 40993672-40998671 Glycine max
Glyma.07G229800 10.0kb upstream 10.0kb upstream 12442 true Chr07: 40998672-41011113 Glycine max
Glyma.07G229800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 41001114-41011113 Glycine max
Glyma.07G229800 10.0kb downstream 10.0kb downstream 12442 true Chr07: 40988672-41001113 Glycine max
Glyma.07G229800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 40988672-40998671 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791710 5273 Angiosperm View MSA
122309640 5265 Fabidae View MSA
124067697 5270 Rosid View MSA
123742453 5271 Pentapetalae View MSA
122786457 5272 Eudicot View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.00701 0.0 19.2238   High
cufflinks 3.69262 0.0 10.8153    
cufflinks 5.97194 0.0 16.5267    
cufflinks 2.3209 0.0 7.22616    
cufflinks 2.01957 0.0 6.46565    
cufflinks 1.16925 0.0 4.00783   Low
cufflinks 1.70684 0.0 5.59634    
cufflinks 7.24022 0.0 19.7679   High
cufflinks 4.57292 0.0 13.0726    
cufflinks 3.236        
cufflinks 2.675        
cufflinks 7.651     High High
cufflinks 4.705        
cufflinks 2.183        
cufflinks 0.951       Low
cufflinks 3.265        
cufflinks 0.458       Low
cufflinks 5.949       High
cufflinks 3.692        
cufflinks 4.078        
cufflinks 2.427        
cufflinks 3.046        
cufflinks 2.806        
cufflinks 1.883        
cufflinks 3.713        
cufflinks 1.176       Low

0 Strain