Gene : Glyma.07G218100 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2181
Name:  ? Glyma.07G218100 Secondary Identifier:  ? PAC:30494699
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G218100 0.5kb upstream 0.5kb upstream 9229 true Chr07: 39104081-39113309 Glycine max
Glyma.07G218100 0.5kb upstream 0.5kb upstream 500 false Chr07: 39104081-39104580 Glycine max
Glyma.07G218100 0.5kb downstream 0.5kb downstream 9229 true Chr07: 39104581-39113809 Glycine max
Glyma.07G218100 0.5kb downstream 0.5kb downstream 500 false Chr07: 39113310-39113809 Glycine max
Glyma.07G218100 1.0kb upstream 1.0kb upstream 9729 true Chr07: 39103581-39113309 Glycine max
Glyma.07G218100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39103581-39104580 Glycine max
Glyma.07G218100 1.0kb downstream 1.0kb downstream 9729 true Chr07: 39104581-39114309 Glycine max
Glyma.07G218100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39113310-39114309 Glycine max
Glyma.07G218100 2.0kb upstream 2.0kb upstream 10729 true Chr07: 39102581-39113309 Glycine max
Glyma.07G218100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39102581-39104580 Glycine max
Glyma.07G218100 2.0kb downstream 2.0kb downstream 10729 true Chr07: 39104581-39115309 Glycine max
Glyma.07G218100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39113310-39115309 Glycine max
Glyma.07G218100 5.0kb upstream 5.0kb upstream 13729 true Chr07: 39099581-39113309 Glycine max
Glyma.07G218100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39099581-39104580 Glycine max
Glyma.07G218100 5.0kb downstream 5.0kb downstream 13729 true Chr07: 39104581-39118309 Glycine max
Glyma.07G218100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39113310-39118309 Glycine max
Glyma.07G218100 10.0kb upstream 10.0kb upstream 18729 true Chr07: 39094581-39113309 Glycine max
Glyma.07G218100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39094581-39104580 Glycine max
Glyma.07G218100 10.0kb downstream 10.0kb downstream 18729 true Chr07: 39104581-39123309 Glycine max
Glyma.07G218100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39113310-39123309 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303154 5265 Fabidae View MSA
124072513 5270 Rosid View MSA
123747473 5271 Pentapetalae View MSA
122794645 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.46368 0.0 4.46299    
cufflinks 1.72312 0.0 5.13161    
cufflinks 1.02036 0.0 3.25352    
cufflinks 1.74321 0.0 5.18096    
cufflinks 1.2245 0.0 3.83876    
cufflinks 0.51387 0.0 1.78832   Low
cufflinks 2.31199 0.0 6.64196   High
cufflinks 1.27891 0.0 3.97761    
cufflinks 1.37206 0.0 4.21978    
cufflinks 0.614        
cufflinks 0.154       Low
cufflinks 1.283        
cufflinks 0.675        
cufflinks 0.817        
cufflinks 0.436        
cufflinks 1.456        
cufflinks 0.365        
cufflinks 1.486        
cufflinks 1.513        
cufflinks 1.73       High
cufflinks 0.169       Low
cufflinks 1.641        
cufflinks 1.273        
cufflinks 0.154       Low
cufflinks 1.61        
cufflinks 0.214       Low

0 Strain