Gene : Glyma.07G220900 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG1522 - RNA polymerase II, subunit POLR2C/RPB3 Genomic Order:  2209
Name:  ? Glyma.07G220900 Secondary Identifier:  ? PAC:30493165
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G220900 0.5kb upstream 0.5kb upstream 3707 true Chr07: 39605270-39608976 Glycine max
Glyma.07G220900 0.5kb upstream 0.5kb upstream 500 false Chr07: 39605270-39605769 Glycine max
Glyma.07G220900 0.5kb downstream 0.5kb downstream 3707 true Chr07: 39605770-39609476 Glycine max
Glyma.07G220900 0.5kb downstream 0.5kb downstream 500 false Chr07: 39608977-39609476 Glycine max
Glyma.07G220900 1.0kb upstream 1.0kb upstream 4207 true Chr07: 39604770-39608976 Glycine max
Glyma.07G220900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39604770-39605769 Glycine max
Glyma.07G220900 1.0kb downstream 1.0kb downstream 4207 true Chr07: 39605770-39609976 Glycine max
Glyma.07G220900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39608977-39609976 Glycine max
Glyma.07G220900 2.0kb upstream 2.0kb upstream 5207 true Chr07: 39603770-39608976 Glycine max
Glyma.07G220900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39603770-39605769 Glycine max
Glyma.07G220900 2.0kb downstream 2.0kb downstream 5207 true Chr07: 39605770-39610976 Glycine max
Glyma.07G220900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39608977-39610976 Glycine max
Glyma.07G220900 5.0kb upstream 5.0kb upstream 8207 true Chr07: 39600770-39608976 Glycine max
Glyma.07G220900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39600770-39605769 Glycine max
Glyma.07G220900 5.0kb downstream 5.0kb downstream 8207 true Chr07: 39605770-39613976 Glycine max
Glyma.07G220900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39608977-39613976 Glycine max
Glyma.07G220900 10.0kb upstream 10.0kb upstream 13207 true Chr07: 39595770-39608976 Glycine max
Glyma.07G220900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39595770-39605769 Glycine max
Glyma.07G220900 10.0kb downstream 10.0kb downstream 13207 true Chr07: 39605770-39618976 Glycine max
Glyma.07G220900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39608977-39618976 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301418 5265 Fabidae View MSA
124066500 5270 Rosid View MSA
123743057 5271 Pentapetalae View MSA
122793148 5272 Eudicot View MSA
122045385 5273 Angiosperm View MSA
121347038 5274 Embryophyte View MSA
123424070 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4708 0.0 31.3299    
cufflinks 18.2756 0.0 48.8957    
cufflinks 6.0605 0.0 17.6652   Low
cufflinks 12.8343 0.0 34.8275    
cufflinks 14.3596 0.0 38.6731    
cufflinks 13.519 0.0 36.5425    
cufflinks 24.3585 0.0 65.0002 High High
cufflinks 10.9434 0.0 30.016    
cufflinks 14.9657 0.0 40.2764    
cufflinks 2.707        
cufflinks 1.056       Low
cufflinks 3.272        
cufflinks 4.809        
cufflinks 6.111       High
cufflinks 2.049        
cufflinks 4.65        
cufflinks 1.937        
cufflinks 3.941        
cufflinks 6.581       High
cufflinks 3.344        
cufflinks 1.239       Low
cufflinks 3.406        
cufflinks 5.449       High
cufflinks 1.296       Low
cufflinks 3.494        
cufflinks 2.246        

0 Strain