Gene : Glyma.07G221100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11353:SF99 - CHAPERONIN 60 SUBUNIT ALPHA 2, CHLOROPLASTIC Genomic Order:  2211
Name:  ? Glyma.07G221100 Secondary Identifier:  ? PAC:30491419
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G221100 0.5kb upstream 0.5kb upstream 8497 true Chr07: 39634470-39642966 Glycine max
Glyma.07G221100 0.5kb upstream 0.5kb upstream 500 false Chr07: 39642467-39642966 Glycine max
Glyma.07G221100 0.5kb downstream 0.5kb downstream 8497 true Chr07: 39633970-39642466 Glycine max
Glyma.07G221100 0.5kb downstream 0.5kb downstream 500 false Chr07: 39633970-39634469 Glycine max
Glyma.07G221100 1.0kb upstream 1.0kb upstream 8997 true Chr07: 39634470-39643466 Glycine max
Glyma.07G221100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39642467-39643466 Glycine max
Glyma.07G221100 1.0kb downstream 1.0kb downstream 8997 true Chr07: 39633470-39642466 Glycine max
Glyma.07G221100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39633470-39634469 Glycine max
Glyma.07G221100 2.0kb upstream 2.0kb upstream 9997 true Chr07: 39634470-39644466 Glycine max
Glyma.07G221100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39642467-39644466 Glycine max
Glyma.07G221100 2.0kb downstream 2.0kb downstream 9997 true Chr07: 39632470-39642466 Glycine max
Glyma.07G221100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39632470-39634469 Glycine max
Glyma.07G221100 5.0kb upstream 5.0kb upstream 12997 true Chr07: 39634470-39647466 Glycine max
Glyma.07G221100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39642467-39647466 Glycine max
Glyma.07G221100 5.0kb downstream 5.0kb downstream 12997 true Chr07: 39629470-39642466 Glycine max
Glyma.07G221100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39629470-39634469 Glycine max
Glyma.07G221100 10.0kb upstream 10.0kb upstream 17997 true Chr07: 39634470-39652466 Glycine max
Glyma.07G221100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39642467-39652466 Glycine max
Glyma.07G221100 10.0kb downstream 10.0kb downstream 17997 true Chr07: 39624470-39642466 Glycine max
Glyma.07G221100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39624470-39634469 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302563 5265 Fabidae View MSA
124066772 5270 Rosid View MSA
123747305 5271 Pentapetalae View MSA
122795365 5272 Eudicot View MSA
122048196 5273 Angiosperm View MSA
121346372 5274 Embryophyte View MSA
123427883 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.137 0.0 15.8367   High
cufflinks 2.02905 0.0 14.613    
cufflinks 1.6931 0.0 11.0934    
cufflinks 1.46866 0.0 9.98736    
cufflinks 1.43909 0.0 8.38179    
cufflinks 1.62985 0.0 8.96345    
cufflinks 1.58011 0.0 7.27959    
cufflinks 1.57038 0.0 8.59419    
cufflinks 1.68757 0.0 9.01726    
cufflinks 0.063     Low Low
cufflinks 0.063       Low
cufflinks 0.114     Low  
cufflinks 0.096        
cufflinks 0.116        
cufflinks 0.099        
cufflinks 0.162        
cufflinks 0.05     Low Low
cufflinks 0.139        
cufflinks 0.148        
cufflinks 0.213       High
cufflinks 0.079        
cufflinks 0.2       High
cufflinks 0.202       High
cufflinks 0.061       Low
cufflinks 0.201       High
cufflinks 0.057     Low Low

0 Strain