Gene : Glyma.07G221300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11715//PTHR11715:SF9 - GLYCINE CLEAVAGE SYSTEM H PROTEIN Genomic Order:  2213
Name:  ? Glyma.07G221300 Secondary Identifier:  ? PAC:30492834
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G221300 0.5kb upstream 0.5kb upstream 3306 true Chr07: 39663346-39666651 Glycine max
Glyma.07G221300 0.5kb upstream 0.5kb upstream 500 false Chr07: 39666152-39666651 Glycine max
Glyma.07G221300 0.5kb downstream 0.5kb downstream 3306 true Chr07: 39662846-39666151 Glycine max
Glyma.07G221300 0.5kb downstream 0.5kb downstream 500 false Chr07: 39662846-39663345 Glycine max
Glyma.07G221300 1.0kb upstream 1.0kb upstream 3806 true Chr07: 39663346-39667151 Glycine max
Glyma.07G221300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39666152-39667151 Glycine max
Glyma.07G221300 1.0kb downstream 1.0kb downstream 3806 true Chr07: 39662346-39666151 Glycine max
Glyma.07G221300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39662346-39663345 Glycine max
Glyma.07G221300 2.0kb upstream 2.0kb upstream 4806 true Chr07: 39663346-39668151 Glycine max
Glyma.07G221300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39666152-39668151 Glycine max
Glyma.07G221300 2.0kb downstream 2.0kb downstream 4806 true Chr07: 39661346-39666151 Glycine max
Glyma.07G221300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39661346-39663345 Glycine max
Glyma.07G221300 5.0kb upstream 5.0kb upstream 7806 true Chr07: 39663346-39671151 Glycine max
Glyma.07G221300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39666152-39671151 Glycine max
Glyma.07G221300 5.0kb downstream 5.0kb downstream 7806 true Chr07: 39658346-39666151 Glycine max
Glyma.07G221300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39658346-39663345 Glycine max
Glyma.07G221300 10.0kb upstream 10.0kb upstream 12806 true Chr07: 39663346-39676151 Glycine max
Glyma.07G221300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39666152-39676151 Glycine max
Glyma.07G221300 10.0kb downstream 10.0kb downstream 12806 true Chr07: 39653346-39666151 Glycine max
Glyma.07G221300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39653346-39663345 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314800 5265 Fabidae View MSA
124062374 5270 Rosid View MSA
123736727 5271 Pentapetalae View MSA
122785842 5272 Eudicot View MSA
122045922 5273 Angiosperm View MSA
121349488 5274 Embryophyte View MSA
123424429 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.6309 0.0 69.9996   Low
cufflinks 81.9454 0.0 285.083 High  
cufflinks 18.1293 0.0 65.2143   Low
cufflinks 77.0085 0.0 266.11 High  
cufflinks 102.922 0.0 372.89 High  
cufflinks 151.201 0.0 608.445 High High
cufflinks 33.5251 0.0 112.176 High  
cufflinks 150.089 0.0 606.687 High High
cufflinks 81.5396 0.0 283.917 High  
cufflinks 22.814     High High
cufflinks 1.189       Low
cufflinks 3.254        
cufflinks 20.657     High High
cufflinks 28.566     High High
cufflinks 1.078       Low
cufflinks 5.649        
cufflinks 4.899        
cufflinks 8.499     High  
cufflinks 16.261     High High
cufflinks 2.672        
cufflinks 2.584        
cufflinks 3.737        
cufflinks 6.126        
cufflinks 2.541        
cufflinks 3.979        
cufflinks 3.222        

0 Strain