Gene : Glyma.07G222200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31521:SF2 - EXPRESSED PROTEIN Genomic Order:  2222
Name:  ? Glyma.07G222200 Secondary Identifier:  ? PAC:30493393
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G222200 0.5kb upstream 0.5kb upstream 9115 true Chr07: 39762520-39771634 Glycine max
Glyma.07G222200 0.5kb upstream 0.5kb upstream 500 false Chr07: 39771135-39771634 Glycine max
Glyma.07G222200 0.5kb downstream 0.5kb downstream 9115 true Chr07: 39762020-39771134 Glycine max
Glyma.07G222200 0.5kb downstream 0.5kb downstream 500 false Chr07: 39762020-39762519 Glycine max
Glyma.07G222200 1.0kb upstream 1.0kb upstream 9615 true Chr07: 39762520-39772134 Glycine max
Glyma.07G222200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39771135-39772134 Glycine max
Glyma.07G222200 1.0kb downstream 1.0kb downstream 9615 true Chr07: 39761520-39771134 Glycine max
Glyma.07G222200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39761520-39762519 Glycine max
Glyma.07G222200 2.0kb upstream 2.0kb upstream 10615 true Chr07: 39762520-39773134 Glycine max
Glyma.07G222200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39771135-39773134 Glycine max
Glyma.07G222200 2.0kb downstream 2.0kb downstream 10615 true Chr07: 39760520-39771134 Glycine max
Glyma.07G222200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39760520-39762519 Glycine max
Glyma.07G222200 5.0kb upstream 5.0kb upstream 13615 true Chr07: 39762520-39776134 Glycine max
Glyma.07G222200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39771135-39776134 Glycine max
Glyma.07G222200 5.0kb downstream 5.0kb downstream 13615 true Chr07: 39757520-39771134 Glycine max
Glyma.07G222200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39757520-39762519 Glycine max
Glyma.07G222200 10.0kb upstream 10.0kb upstream 18615 true Chr07: 39762520-39781134 Glycine max
Glyma.07G222200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39771135-39781134 Glycine max
Glyma.07G222200 10.0kb downstream 10.0kb downstream 18615 true Chr07: 39752520-39771134 Glycine max
Glyma.07G222200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39752520-39762519 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309121 5265 Fabidae View MSA
124069914 5270 Rosid View MSA
123749544 5271 Pentapetalae View MSA
122793000 5272 Eudicot View MSA
122042486 5273 Angiosperm View MSA
121345558 5274 Embryophyte View MSA
123380236 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.924 0.0 21.1967    
cufflinks 10.8424 0.0 37.4677    
cufflinks 5.87638 0.0 21.1577    
cufflinks 12.7576 0.0 43.4894    
cufflinks 12.4079 0.0 42.3249    
cufflinks 46.8682 0.0 205.775 High High
cufflinks 7.0973 0.0 25.0006    
cufflinks 23.0175 0.0 83.5237 High High
cufflinks 5.58171 0.0 20.117    
cufflinks 1.195        
cufflinks 0.024     Low Low
cufflinks 1.343       High
cufflinks 0.728        
cufflinks 0.411        
cufflinks 0.061       Low
cufflinks 0.571        
cufflinks 0.225        
cufflinks 1.257        
cufflinks 1.338       High
cufflinks 0.605        
cufflinks 0.024     Low Low
cufflinks 0.764        
cufflinks 0.681        
cufflinks 0.043     Low Low
cufflinks 0.592        
cufflinks 0.072       Low

0 Strain